RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 C9orf62Q8N4C0 152 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 IGF2BP2-AS1Q96M15 143 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 SLC35B3Q9H1N7 401 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 OR51M1Q9H341 326 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 DNAH2Q9P225 4427 aa9.49□□□□□ -0.89
TRAF4-214ENST00000580073 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-214ENST00000580073 RHOBP62745 196 aa9.48□□□□□ -0.89
TRAF4-214ENST00000580073 SERF2P84101 59 aa9.48□□□□□ -0.89
TRAF4-214ENST00000580073 PSG3Q16557 428 aa9.48□□□□□ -0.89
TRAF4-214ENST00000580073 GNPNAT1Q96EK6 184 aaPredicted RBP9.48□□□□□ -0.89
TRAF4-214ENST00000580073 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
TRAF4-214ENST00000580073 RNF24Q9Y225 148 aa9.48□□□□□ -0.89
TRAF4-214ENST00000580073 A8MTW9 85 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 NBEAP1P0C6P0 100 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 LCN15Q6UWW0 184 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 BLNKQ8WV28 456 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 RNF141Q8WVD5 230 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 RAB24Q969Q5 203 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 PHYHIPLQ96FC7 376 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 HYLS1Q96M11 299 aa9.47□□□□□ -0.89
TRAF4-214ENST00000580073 ZNF471Q9BX82 626 aaPredicted RBP9.47□□□□□ -0.89
TRAF4-214ENST00000580073 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
TRAF4-214ENST00000580073 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 M0R3E3 92 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 STAG3L2P0CL84 134 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 STAG3L3P0CL85 134 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 TSPOP30536 169 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.9
TRAF4-214ENST00000580073 FHITP49789 147 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 TMEM256Q8N2U0 113 aa9.46□□□□□ -0.9
TRAF4-214ENST00000580073 OR7C2O60412 319 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 CCL18P55774 89 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 GUK1Q16774 197 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 ZFP69Q49AA0 526 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 AMTNQ6UX39 209 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 ZNF738Q8NE65 137 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 LRRC20Q8TCA0 184 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 RPUSD4Q96CM3 377 aaKnown RBP9.45□□□□□ -0.9
TRAF4-214ENST00000580073 SLC50A1Q9BRV3 221 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 BOLA1Q9Y3E2 137 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
TRAF4-214ENST00000580073 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 PFDN1O60925 122 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 ZNF253O75346 499 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 MBP02144 154 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 ATP5G1P05496 136 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 SEC11BP0C7V7 166 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 ARL14EPLP0DKL9 152 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 ATP5G3P48201 142 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 CNN1P51911 297 aaKnown RBP9.44□□□□□ -0.9
TRAF4-214ENST00000580073 KHDC3LQ587J8 217 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 BAP18Q8IXM2 172 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 SUN5Q8TC36 379 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 C16orf74Q96GX8 76 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 TMPRSS5Q9H3S3 457 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 PPP1R14DQ9NXH3 145 aa9.44□□□□□ -0.9
TRAF4-214ENST00000580073 DYNC1H1Q14204 4646 aaKnown RBP9.43□□□□□ -0.9
TRAF4-214ENST00000580073 BOLA2-SMG1P6H3BVE0 249 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 CDK2AP2O75956 126 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 GCHFRP30047 84 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 UBE2L3P68036 154 aaKnown RBP9.43□□□□□ -0.9
TRAF4-214ENST00000580073 PDE6HQ13956 83 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 ICAM4Q14773 271 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 TMED6Q8WW62 240 aa9.43□□□□□ -0.9
TRAF4-214ENST00000580073 ACTR3CQ9C0K3 210 aaPredicted RBP9.43□□□□□ -0.9
TRAF4-214ENST00000580073 NBDYA0A0U1RRE5 68 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 M0R2Z0 102 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 FGF8P55075 233 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-214ENST00000580073 TAS2R45P59539 299 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 RANP62826 216 aaKnown RBP9.42□□□□□ -0.9
TRAF4-214ENST00000580073 ERCC8Q13216 396 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 AKR1C8PQ5T2L2 129 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 Q9H3A6 140 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 PKD1P98161 4303 aa9.42□□□□□ -0.9
TRAF4-214ENST00000580073 RYR1P21817 5038 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 CTXND1A0A1B0GTU2 59 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 F5H768 121 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 NUDT3O95989 172 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 TPT1P13693 172 aaKnown RBP9.41□□□□□ -0.9
TRAF4-214ENST00000580073 TAS2R60P59551 318 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
TRAF4-214ENST00000580073 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
TRAF4-214ENST00000580073 IGKV2-40A0A087WW87 121 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-214ENST00000580073 ZNF705GA8MUZ8 300 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-214ENST00000580073 CRXO43186 299 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-214ENST00000580073 IGKV2D-40P01614 121 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms