RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 PRR9Q5T870 116 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 MIR17HGQ75NE6 70 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 C11orf72Q8NBR9 251 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 VGLL1Q99990 258 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 PYGO2Q9BRQ0 406 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 Q9H3A6 140 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 MRPS16Q9Y3D3 137 aaKnown RBP6.15□□□□□ -1.42
GGA3-207ENST00000578896 TIMM9Q9Y5J7 89 aa6.15□□□□□ -1.42
GGA3-207ENST00000578896 SIX6O95475 246 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 SLC25A5P05141 298 aaKnown RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 H2AFB2P0C5Z0 115 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 HIST1H1EP10412 219 aaKnown RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 SULT1A1P50225 295 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 NHLH2Q02577 135 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 DAZ2Q13117 558 aaKnown RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 IL15RAQ13261 267 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 ICAM4Q14773 271 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 GUK1Q16774 197 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 VWC2Q2TAL6 325 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 FAM122CQ6P4D5 195 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 THAP6Q8TBB0 222 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 ZNF503Q96F45 646 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 FAM19A4Q96LR4 140 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 ODF3Q96PU9 254 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 PFDN5Q99471 154 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 UPK3BQ9BT76 320 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 SLC25A2Q9BXI2 301 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 GPN1Q9HCN4 374 aaPredicted RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 SCRT2Q9NQ03 307 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 LYRM2Q9NU23 88 aaPredicted RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 MRPL16Q9NX20 251 aaKnown RBP6.14□□□□□ -1.43
GGA3-207ENST00000578896 FUT9Q9Y231 359 aa6.14□□□□□ -1.43
GGA3-207ENST00000578896 KLLNB2CW77 178 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 EIF3GO75821 320 aaKnown RBP eCLIP6.13□□□□□ -1.43
GGA3-207ENST00000578896 GPX1P07203 203 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 PVALBP20472 110 aaPredicted RBP6.13□□□□□ -1.43
GGA3-207ENST00000578896 S100A11P31949 105 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 LINC00315P59091 139 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 CNPY1Q3B7I2 92 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 TTC32Q5I0X7 151 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
GGA3-207ENST00000578896 ZFAND2AQ8N6M9 145 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 Q8TAT8 98 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 FAM167A-AS1Q96KT0 104 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 TMEM14CQ9P0S9 112 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
GGA3-207ENST00000578896 FLG2Q5D862 2391 aaPredicted RBP6.13□□□□□ -1.43
GGA3-207ENST00000578896 RGS13O14921 159 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 PAX4O43316 350 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 SPINK4O60575 86 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 ZNF253O75346 499 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 MPDU1O75352 247 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 OR10J4P0C629 311 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 HBG1P69891 147 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 HBG2P69892 147 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 MUC21Q5SSG8 566 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 STX12Q86Y82 276 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 Q8N1X5 172 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 MRPL53Q96EL3 112 aaKnown RBP6.12□□□□□ -1.43
GGA3-207ENST00000578896 LINC00477Q96M19 166 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 C8orf49Q96NF6 230 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 NPCDR1Q9BY65 106 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 OR5AC2Q9NZP5 309 aa6.12□□□□□ -1.43
GGA3-207ENST00000578896 IGHV1OR15-1A0A075B7D0 117 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 FAM240BA0A1B0GVZ2 78 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 H0YIZ8 118 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 H3BNG1 76 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 PRAF2O60831 178 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 NXPH4O95158 308 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 NBEAP1P0C6P0 100 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 CRISP2P16562 243 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 TCL1AP56279 114 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 ATP6V1FQ16864 119 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 ANXA2RQ3ZCQ2 193 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 LRRC37A5PQ49AS3 106 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 TMEM78Q5T7P6 136 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 Q6ZRN7 208 aaPredicted RBP6.11□□□□□ -1.43
GGA3-207ENST00000578896 C9orf47Q6ZRZ4 202 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 ZNF680Q8NEM1 530 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 OR5C1Q8NGR4 320 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 CHAC2Q8WUX2 184 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 PHYHIPLQ96FC7 376 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 OR51M1Q9H341 326 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 AAMDCQ9H7C9 122 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 ZNF492Q9P255 531 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 PRELID1Q9Y255 219 aa6.11□□□□□ -1.43
GGA3-207ENST00000578896 VPS13BQ7Z7G8 4022 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 A0A1W2PPQ1 181 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 E5RGE8 158 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 SIVA1O15304 175 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 SFTA3P0C7M3 94 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 BTF3P20290 206 aaKnown RBP6.1□□□□□ -1.43
GGA3-207ENST00000578896 PDE6HQ13956 83 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 FHL2Q14192 279 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 FXYD5Q96DB9 178 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 ST6GAL2Q96JF0 529 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 ARPC5LQ9BPX5 153 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 LINC00467Q9BRT7 94 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 PAXXQ9BUH6 204 aa6.1□□□□□ -1.43
GGA3-207ENST00000578896 MDFICQ9P1T7 246 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms