RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IGKV2-40A0A087WW87 121 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 IGSF23A1L1A6 192 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 H3BNG1 76 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 ZNF324O75467 553 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 NDUFB4O95168 129 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 IGKV2D-40P01614 121 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 FGF7P21781 194 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 GUK1Q16774 197 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 ODF3Q96PU9 254 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 PFDN5Q99471 154 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 C11orf1Q9H5F2 150 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 MRPL16Q9NX20 251 aaKnown RBP5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 TIMM9Q9Y5J7 89 aa5.91□□□□□ -1.46
CTDNEP1-203ENST00000570385 A0A1W2PPQ1 181 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 KLLNB2CW77 178 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 SIVA1O15304 175 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 PAX4O43316 350 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 LYRM1O43325 122 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 MPDU1O75352 247 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 NXPH4O95158 308 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 TCRBP04435 133 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 GPX1P07203 203 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 HIST1H1EP10412 219 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 PVALBP20472 110 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 RPL29P47914 159 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 RAB32Q13637 225 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 ICAM4Q14773 271 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 PRR9Q5T870 116 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 FAM122CQ6P4D5 195 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 C12orf45Q8N5I9 185 aaPredicted RBP5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 EIF4E3Q8N5X7 224 aaKnown RBP5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 TMEM252Q8N6L7 170 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 ZNF680Q8NEM1 530 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 C2orf50Q96LR7 162 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 VGLL1Q99990 258 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 NUDT15Q9NV35 164 aa5.9□□□□□ -1.46
CTDNEP1-203ENST00000570385 RGS13O14921 159 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 SPINK4O60575 86 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 PRAF2O60831 178 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 ZNF253O75346 499 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 S100A11P31949 105 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 SULT1A1P50225 295 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 TCL1AP56279 114 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 VWC2Q2TAL6 325 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 MUC21Q5SSG8 566 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 Q6ZRN7 208 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 MIR17HGQ75NE6 70 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 ZFAND2AQ8N6M9 145 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 Q8TAT8 98 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 THAP6Q8TBB0 222 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 MRPL53Q96EL3 112 aaKnown RBP5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 FAM19A4Q96LR4 140 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 LINC00477Q96M19 166 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 C8orf49Q96NF6 230 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 SLC25A2Q9BXI2 301 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 AAMDCQ9H7C9 122 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 GPN1Q9HCN4 374 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 LYRM2Q9NU23 88 aaPredicted RBP5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 TMEM14CQ9P0S9 112 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 ICOSQ9Y6W8 199 aa5.89□□□□□ -1.47
CTDNEP1-203ENST00000570385 E5RGE8 158 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 H2AFB2P0C5Z0 115 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 OR10J4P0C629 311 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 DNAH10OSP0CZ25 163 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 HBG1P69891 147 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 HBG2P69892 147 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 NHLH2Q02577 135 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 CNPY1Q3B7I2 92 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 TMEM78Q5T7P6 136 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 STX12Q86Y82 276 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 ST6GAL2Q96JF0 529 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 ARPC5LQ9BPX5 153 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 PRELID1Q9Y255 219 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 FAT1Q14517 4588 aa5.88□□□□□ -1.47
CTDNEP1-203ENST00000570385 IGHV1OR15-1A0A075B7D0 117 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 EPM2AB3EWF7 344 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 SIX6O95475 246 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 NBEAP1P0C6P0 100 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 SFTA3P0C7M3 94 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 CRISP2P16562 243 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 CRYBA4P53673 196 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 IL15RAQ13261 267 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 FHL2Q14192 279 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 LYPD5Q6UWN5 251 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 C9orf47Q6ZRZ4 202 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 FAM167A-AS1Q96KT0 104 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 C18orf15Q96N68 181 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 LINC00467Q9BRT7 94 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 NPCDR1Q9BY65 106 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 MDFICQ9P1T7 246 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 ZNF492Q9P255 531 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 PRO0255Q9UI72 69 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 HHLA3Q9XRX5 114 aa5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 DMBT1Q9UGM3 2413 aaPredicted RBP5.87□□□□□ -1.47
CTDNEP1-203ENST00000570385 TRGV4A0A0C4DH28 118 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 EREGO14944 169 aa5.86□□□□□ -1.47
CTDNEP1-203ENST00000570385 EIF3GO75821 320 aaKnown RBP eCLIP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms