RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 OR2K2Q8NGT1 345 aa22.86■■□□□ 1.25
CTCF-203ENST00000566078 FBLL1A6NHQ2 334 aaKnown RBP22.85■■□□□ 1.25
CTCF-203ENST00000566078 F6UB75 175 aa22.85■■□□□ 1.25
CTCF-203ENST00000566078 ZNF705DP0CH99 300 aaPredicted RBP22.85■■□□□ 1.25
CTCF-203ENST00000566078 ZNF705BP0CI00 300 aaPredicted RBP22.85■■□□□ 1.25
CTCF-203ENST00000566078 MGST1P10620 155 aaKnown RBP22.85■■□□□ 1.25
CTCF-203ENST00000566078 Q8TAT8 98 aa22.85■■□□□ 1.25
CTCF-203ENST00000566078 CD33P20138 364 aa22.84■■□□□ 1.25
CTCF-203ENST00000566078 OR10J6PQ8NGY7 276 aa22.84■■□□□ 1.25
CTCF-203ENST00000566078 RHEBQ15382 184 aa22.83■■□□□ 1.25
CTCF-203ENST00000566078 TMEM78Q5T7P6 136 aa22.83■■□□□ 1.25
CTCF-203ENST00000566078 OR8A1Q8NGG7 326 aa22.83■■□□□ 1.25
CTCF-203ENST00000566078 ZNF256Q9Y2P7 627 aaPredicted RBP22.83■■□□□ 1.25
CTCF-203ENST00000566078 C7orf77A4D0Y5 90 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 HIST1H1AQ02539 215 aaPredicted RBP22.82■■□□□ 1.24
CTCF-203ENST00000566078 C9orf47Q6ZRZ4 202 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 ISOC2Q96AB3 205 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 SMIM12Q96EX1 92 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 AGPAT4-IT1Q9H0P7 198 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 ZFP30Q9Y2G7 519 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 OR5I1Q13606 314 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 C9orf66Q5T8R8 295 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 TMEM183AQ8IXX5 376 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 RPS10P5Q9NQ39 176 aa22.82■■□□□ 1.24
CTCF-203ENST00000566078 B4DEV8 164 aa22.81■■□□□ 1.24
CTCF-203ENST00000566078 SCO1O75880 301 aa22.81■■□□□ 1.24
CTCF-203ENST00000566078 MLST8Q9BVC4 326 aa22.81■■□□□ 1.24
CTCF-203ENST00000566078 TRRAPQ9Y4A5 3859 aa22.8■■□□□ 1.24
CTCF-203ENST00000566078 NPIPB6E9PJ23 425 aa22.8■■□□□ 1.24
CTCF-203ENST00000566078 MAP6D1Q9H9H5 199 aa22.8■■□□□ 1.24
CTCF-203ENST00000566078 AGRNO00468 2067 aa22.8■■□□□ 1.24
CTCF-203ENST00000566078 GCGP01275 180 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 DEFB131AP59861 70 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 PRR25Q96S07 402 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 GPR61Q9BZJ8 451 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 INSL3P51460 131 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 ZNF138P52744 262 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 GDF5OSQ5U4N7 250 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 C8orf49Q96NF6 230 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 NDFIP1Q9BT67 221 aa22.79■■□□□ 1.24
CTCF-203ENST00000566078 SAPCD1Q5SSQ6 148 aa22.78■■□□□ 1.24
CTCF-203ENST00000566078 PRR27Q6MZM9 219 aa22.78■■□□□ 1.24
CTCF-203ENST00000566078 ZNF492Q9P255 531 aa22.78■■□□□ 1.24
CTCF-203ENST00000566078 RNF212Q495C1 297 aa22.77■■□□□ 1.24
CTCF-203ENST00000566078 LURAP1LQ8IV03 231 aa22.77■■□□□ 1.24
CTCF-203ENST00000566078 WFDC9Q8NEX5 89 aa22.77■■□□□ 1.24
CTCF-203ENST00000566078 LINC00477Q96M19 166 aa22.77■■□□□ 1.24
CTCF-203ENST00000566078 MCRIP2Q9BUT9 160 aaKnown RBP22.77■■□□□ 1.24
CTCF-203ENST00000566078 A0A0J9YX75 114 aa22.76■■□□□ 1.23
CTCF-203ENST00000566078 EBLN2Q6P2I7 272 aa22.76■■□□□ 1.23
CTCF-203ENST00000566078 ZC2HC1AQ96GY0 325 aa22.76■■□□□ 1.23
CTCF-203ENST00000566078 SFRP2Q96HF1 295 aa22.76■■□□□ 1.23
CTCF-203ENST00000566078 SAV1Q9H4B6 383 aaPredicted RBP22.76■■□□□ 1.23
CTCF-203ENST00000566078 FOXI2Q6ZQN5 318 aa22.75■■□□□ 1.23
CTCF-203ENST00000566078 ANK2Q01484 3957 aa22.75■■□□□ 1.23
CTCF-203ENST00000566078 MT-ND4LP03901 98 aa22.75■■□□□ 1.23
CTCF-203ENST00000566078 CT45A10P0DMU9 189 aa22.74■■□□□ 1.23
CTCF-203ENST00000566078 ODF3L2Q3SX64 289 aa22.74■■□□□ 1.23
CTCF-203ENST00000566078 RNASE7Q9H1E1 156 aaKnown RBP22.74■■□□□ 1.23
CTCF-203ENST00000566078 PPP1R14DQ9NXH3 145 aa22.74■■□□□ 1.23
CTCF-203ENST00000566078 ERVFC1-1P60608 527 aa22.73■■□□□ 1.23
CTCF-203ENST00000566078 BIN3Q9NQY0 253 aa22.73■■□□□ 1.23
CTCF-203ENST00000566078 A0A087WWC5 75 aa22.72■■□□□ 1.23
CTCF-203ENST00000566078 ZNF124Q15973 351 aa22.72■■□□□ 1.23
CTCF-203ENST00000566078 KNCNA6PVL3 124 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 IGLL1P15814 213 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 BEAN1Q3B7T3 259 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 IBA57Q5T440 356 aaKnown RBP22.71■■□□□ 1.23
CTCF-203ENST00000566078 CMYA5Q8N3K9 4069 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 ACTL10Q5JWF8 245 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 COX8CQ7Z4L0 72 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 APRG1Q8IVJ8 170 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 OR10G8Q8NGN5 311 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 ANAPC16Q96DE5 110 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 LENEPQ9Y5L5 61 aa22.71■■□□□ 1.23
CTCF-203ENST00000566078 OR11H12B2RN74 326 aa22.7■■□□□ 1.22
CTCF-203ENST00000566078 DUSP14O95147 198 aaKnown RBP22.7■■□□□ 1.22
CTCF-203ENST00000566078 SMUG1Q53HV7 270 aa22.7■■□□□ 1.22
CTCF-203ENST00000566078 LINC00322Q6ZN03 302 aaPredicted RBP22.7■■□□□ 1.22
CTCF-203ENST00000566078 TMEM88Q6PEY1 159 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 CBLN2Q8IUK8 224 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 C15orf54Q8N8G6 183 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 OR4B1Q8NGF8 309 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 MDFIQ99750 246 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 CTDSP1Q9GZU7 261 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 OSTCQ9NRP0 149 aa22.69■■□□□ 1.22
CTCF-203ENST00000566078 NOTCH3Q9UM47 2321 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 H7BYZ3 331 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 PPP1R2P9O14990 202 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 IGKV3-20P01619 116 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 HLA-DRB4P13762 266 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 FAM231DQ6ZW35 169 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 HLA-DRB4X5D2U9 266 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 CMC4P56277 68 aaPredicted RBP22.68■■□□□ 1.22
CTCF-203ENST00000566078 FAM19A4Q96LR4 140 aa22.68■■□□□ 1.22
CTCF-203ENST00000566078 CD7P09564 240 aa22.67■■□□□ 1.22
CTCF-203ENST00000566078 C19orf71A6NCJ1 209 aa22.66■■□□□ 1.22
CTCF-203ENST00000566078 CRIP1P50238 77 aa22.66■■□□□ 1.22
CTCF-203ENST00000566078 ZNF80P51504 273 aaPredicted RBP22.66■■□□□ 1.22
CTCF-203ENST00000566078 NUDT10Q8NFP7 164 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms