RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 LGI3Q8N145 548 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 LINC00311Q8N616 119 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 OR5D18Q8NGL1 313 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 OR6N2Q8NGY6 317 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 OTOSQ8NHW6 89 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 COQ2Q96H96 371 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 PGAM5Q96HS1 289 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 TXN2Q99757 166 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 BANF2Q9H503 90 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 MANBALQ9NQG1 85 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 MRPL22Q9NWU5 206 aaKnown RBP3.89□□□□□ -1.79
TCF4-213ENST00000562543 CALYQ9NYX4 217 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 IL36RNQ9UBH0 155 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 CACNG5Q9UF02 275 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 LSM5Q9Y4Y9 91 aaKnown RBP3.89□□□□□ -1.79
TCF4-213ENST00000562543 R4GMQ9 66 aa3.89□□□□□ -1.79
TCF4-213ENST00000562543 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.88□□□□□ -1.79
TCF4-213ENST00000562543 NPIPB11E5RHQ5 1161 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 C17orf112F2Z3M2 114 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 RRHO14718 337 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 MT-ND6P03923 174 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 RPS27P42677 84 aaKnown RBP3.88□□□□□ -1.79
TCF4-213ENST00000562543 ZNF137PP52743 207 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 FGF8P55075 233 aaPredicted RBP3.88□□□□□ -1.79
TCF4-213ENST00000562543 YPEL3P61236 119 aaPredicted RBP3.88□□□□□ -1.79
TCF4-213ENST00000562543 QRFPP83859 136 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 Q0VG73 95 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 BATFQ16520 125 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 FAM71F2Q6NXP2 309 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 MRPL54Q6P161 138 aaKnown RBP3.88□□□□□ -1.79
TCF4-213ENST00000562543 C19orf35Q6ZS72 473 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 FAM57BQ71RH2 274 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 NIT1Q86X76 327 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 GPHB5Q86YW7 130 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 CSNK1G2-AS1Q8NCQ2 148 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 OR4S2Q8NH73 311 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 SPSB1Q96BD6 273 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 LINC01600Q96MT4 127 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TMEM56Q96MV1 263 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 NMNAT3Q96T66 252 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 ATP5SQ99766 215 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 SMIM7Q9BQ49 75 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TXNDC17Q9BRA2 123 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TTTY10Q9BZA0 68 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 SMIM3Q9BZL3 60 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 FBXL15Q9H469 300 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 NAA60Q9H7X0 242 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TMEM14BQ9NUH8 114 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TAS2R4Q9NYW5 299 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 EHFQ9NZC4 300 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 HSF4Q9ULV5 492 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 B9D1Q9UPM9 204 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 PXMP4Q9Y6I8 212 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 TMEM56-RWDD3S4R434 201 aa3.88□□□□□ -1.79
TCF4-213ENST00000562543 PRR32B1ATL7 298 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 H0Y8G0 127 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 CORTO00230 105 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 SCGB1D2O95969 90 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 NRASP01111 189 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 KRASP01116 189 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 IGLC2P0DOY2 106 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 IGLC3P0DOY3 106 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 IL3RAP26951 378 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 PSMB3P49720 205 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 ARFRP1Q13795 201 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 MSMO1Q15800 293 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 VAMP3Q15836 100 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 ADIRFQ15847 76 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 LTC4SQ16873 150 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 SPATA45Q537H7 98 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 OR10J3Q5JRS4 329 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 SAMD13Q5VXD3 122 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 PLCXD3Q63HM9 321 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 OR4A47Q6IF82 309 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 Q6ZN92 141 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 GTF2H5Q6ZYL4 71 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 TMEM144Q7Z5S9 345 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 C8orf31Q8N9H6 132 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 OR5D14Q8NGL3 314 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 IL22RA2Q969J5 263 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 TMEM59Q9BXS4 323 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 PBOV1Q9GZY1 135 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 LPAR5Q9H1C0 372 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 SH3BGRL3Q9H299 93 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 C11orf1Q9H5F2 150 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 TIMM9Q9Y5J7 89 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 TRAPPC1Q9Y5R8 145 aa3.87□□□□□ -1.79
TCF4-213ENST00000562543 TEX48A0A1B0GUV7 120 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 LOC107986453A0A1B0GWG9 222 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 IGLC7A0M8Q6 106 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 ZNF878C9JN71 531 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 RBFOX2O43251 390 aaKnown RBP eCLIP3.86□□□□□ -1.79
TCF4-213ENST00000562543 ZNF253O75346 499 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 HYPMO75409 117 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 H2BFMP0C1H6 154 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 OR10J4P0C629 311 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 STAG3L3P0CL85 134 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 SLC25A6P12236 298 aa3.86□□□□□ -1.79
TCF4-213ENST00000562543 TSPOP30536 169 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms