RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 TFPI2P48307 235 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 GNG5P63218 68 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 GUCA2BQ16661 112 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 CD300EQ496F6 205 aaPredicted RBP4.84□□□□□ -1.63
SPG11-221ENST00000560299 SAPCD1Q5SSQ6 148 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 KPRPQ5T749 579 aaPredicted RBP4.84□□□□□ -1.63
SPG11-221ENST00000560299 TMEM78Q5T7P6 136 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 EBLN2Q6P2I7 272 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 ADAMTSL5Q6ZMM2 481 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 BAGE2Q86Y30 109 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 RNF182Q8N6D2 247 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 DCANP1Q8TF63 244 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 NDFIP1Q9BT67 221 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 ZFP30Q9Y2G7 519 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 CARHSP1Q9Y2V2 147 aaKnown RBP4.84□□□□□ -1.63
SPG11-221ENST00000560299 KLF12Q9Y4X4 402 aa4.84□□□□□ -1.63
SPG11-221ENST00000560299 TRAV8-2A0A0B4J237 113 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 DUSP14O95147 198 aaKnown RBP4.83□□□□□ -1.64
SPG11-221ENST00000560299 IGLV1-51P01701 117 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 MT-ND4LP03901 98 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 ZNF688P0C7X2 276 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 FLI1Q01543 452 aaPredicted RBP4.83□□□□□ -1.64
SPG11-221ENST00000560299 CENPWQ5EE01 88 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 PSMG4Q5JS54 123 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 IGFL4Q6B9Z1 124 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 LINC00477Q96M19 166 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 DERL1Q9BUN8 251 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 SDF2L1Q9HCN8 221 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 PPP1R14DQ9NXH3 145 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 PSG8Q9UQ74 426 aa4.83□□□□□ -1.64
SPG11-221ENST00000560299 TRAV34A0A0B4J273 112 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 ZNF705FA8MVS1 300 aaPredicted RBP4.82□□□□□ -1.64
SPG11-221ENST00000560299 PPP1R2P9O14990 202 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 LTAP01374 205 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 MGST1P10620 155 aaKnown RBP4.82□□□□□ -1.64
SPG11-221ENST00000560299 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 HLA-DMBP28068 263 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 ZNF138P52744 262 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 RHEBQ15382 184 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 ADIRFQ15847 76 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 C9orf47Q6ZRZ4 202 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 CLRN3Q8NCR9 226 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 OR8A1Q8NGG7 326 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 DAZAP1Q96EP5 407 aaKnown RBP4.82□□□□□ -1.64
SPG11-221ENST00000560299 LINC00479Q96M42 142 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 FAM110AQ9BQ89 295 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 LENEPQ9Y5L5 61 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 CMYA5Q8N3K9 4069 aa4.82□□□□□ -1.64
SPG11-221ENST00000560299 SORL1Q92673 2214 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 IGKV2-40A0A087WW87 121 aaPredicted RBP4.81□□□□□ -1.64
SPG11-221ENST00000560299 TRBV7-9A0A0J9YWB2 115 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 OR11H12B2RN74 326 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 IGKV2D-40P01614 121 aaPredicted RBP4.81□□□□□ -1.64
SPG11-221ENST00000560299 TSPOP30536 169 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 DEFB131AP59861 70 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 RPL23P62829 140 aaKnown RBP4.81□□□□□ -1.64
SPG11-221ENST00000560299 HIST1H1AQ02539 215 aaPredicted RBP4.81□□□□□ -1.64
SPG11-221ENST00000560299 SMUG1Q53HV7 270 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 FOXI2Q6ZQN5 318 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 Q86TA4 180 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 LINC01551Q86U37 167 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 GTSCR1Q86UQ5 136 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 TMEM183AQ8IXX5 376 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 C15orf54Q8N8G6 183 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 OCC1Q8TAD7 63 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 C20orf173Q96LM9 149 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 SGK494Q96LW2 274 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 IGF2BP2-AS1Q96M15 143 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 CTDSP1Q9GZU7 261 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 AGPAT4-IT1Q9H0P7 198 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 SELENOKQ9Y6D0 94 aa4.81□□□□□ -1.64
SPG11-221ENST00000560299 TRBV20OR9-2A0A075B6H5 130 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 A0A087WWC5 75 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 TRAV8-1A0A0A6YYK1 113 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 A0A0J9YX75 114 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 C7orf77A4D0Y5 90 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 PRAC2D3DTV9 90 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 NPIPB6E9PJ23 425 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 GCGP01275 180 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 IGLV2-11P01706 119 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 LEPP41159 167 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 ERVFC1-1P60608 527 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 NUTF2P61970 127 aaKnown RBP4.8□□□□□ -1.64
SPG11-221ENST00000560299 EGFEM1PQ0D2K5 195 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 ERCC8Q13216 396 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 IBA57Q5T440 356 aaKnown RBP4.8□□□□□ -1.64
SPG11-221ENST00000560299 SAMD5Q5TGI4 173 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 OR4B1Q8NGF8 309 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 SFRP2Q96HF1 295 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 PRR25Q96S07 402 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 ASCL2Q99929 193 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 VGLL1Q99990 258 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 SAV1Q9H4B6 383 aaPredicted RBP4.8□□□□□ -1.64
SPG11-221ENST00000560299 MAP6D1Q9H9H5 199 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 RPS10P5Q9NQ39 176 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 TMEM242Q9NWH2 141 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms