RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 TMEM208Q9BTX3 173 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 SLC25A39Q9BZJ4 359 aaPredicted RBP5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 WDR61Q9GZS3 305 aaKnown RBP5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 SLC35B3Q9H1N7 401 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 UQCC1Q9NVA1 299 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 PPP1R14DQ9NXH3 145 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 CELA1Q9UNI1 258 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 TIMM9Q9Y5J7 89 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 DNAH1Q9P2D7 4330 aa5.53□□□□□ -1.52
HNRNPC-226ENST00000556628 LOC102723971A0A1B0GUV8 181 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 KRBOX1C9JBD0 128 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 C17orf112F2Z3M2 114 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 ARL16Q0P5N6 197 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 RAB31Q13636 194 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 AKR1C8PQ5T2L2 129 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 PXDC1Q5TGL8 231 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 TMEM182Q6ZP80 229 aaPredicted RBP5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 ZNF709Q8N972 641 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 ZNF738Q8NE65 137 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 LYPD6BQ8NI32 183 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 IGF2BP2-AS1Q96M15 143 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 NIPSNAP3BQ9BS92 247 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 SHANK2-AS3Q9BTD1 123 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 NDUFAF3Q9BU61 184 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 SCRT1Q9BWW7 348 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 SH3BGRL3Q9H299 93 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 KCNIP2Q9NS61 270 aa5.52□□□□□ -1.53
HNRNPC-226ENST00000556628 UBE2L5PA0A1B0GUS4 154 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 INSP01308 110 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 MBP02144 154 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 P0DMU3 169 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 FAM231AP0DMU4 169 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 FAM231CP0DMU5 169 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 FGF7P21781 194 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 PLP1P60201 277 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 B2MP61769 119 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 RHOBP62745 196 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 FAM222AQ5U5X8 452 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 C1orf158Q8N1D5 194 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 FAM210BQ96KR6 192 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 UHRF2Q96PU4 802 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 WDR83OSQ9Y284 106 aa5.51□□□□□ -1.53
HNRNPC-226ENST00000556628 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 A0A087X0K7 114 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 C9orf118A6NHY6 69 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 A8MTW9 85 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 COX7A2P2O60397 106 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 HTN3P15516 51 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 CNN1P51911 297 aaKnown RBP5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 DAD1P61803 113 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 HIST1H1AQ02539 215 aaPredicted RBP5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 PSG3Q16557 428 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 SPINK13Q1W4C9 94 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 BPIFA4PQ86YQ2 179 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 RNF182Q8N6D2 247 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 SYT8Q8NBV8 401 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 FAM213BQ8TBF2 198 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 NPCDR1Q9BY65 106 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 SMDT1Q9H4I9 107 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 DKK2Q9UBU2 259 aa5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 YTHDF2Q9Y5A9 579 aaKnown RBP5.5□□□□□ -1.53
HNRNPC-226ENST00000556628 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 TRAV8-2A0A0B4J237 113 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 TRAV1-1A0A0B4J248 108 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 M0R2Z0 102 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 AGPAT2O15120 278 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 PEA15Q15121 130 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 C10orf113Q5VZT2 155 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 IGFL4Q6B9Z1 124 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 LCN15Q6UWW0 184 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 AMTNQ6UX39 209 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 LINC00305Q7Z4B0 112 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 OR8A1Q8NGG7 326 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 SLC50A1Q9BRV3 221 aa5.49□□□□□ -1.53
HNRNPC-226ENST00000556628 LYRM9A8MSI8 78 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 ZNF705GA8MUZ8 300 aaPredicted RBP5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 FHITP49789 147 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 ACOT6Q3I5F7 207 aaPredicted RBP5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 PATE2Q6UY27 113 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 TMEM256Q8N2U0 113 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 POM121L12Q8N7R1 296 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 OR1L4Q8NGR5 311 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 OR10J6PQ8NGY7 276 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 MBD3L1Q8WWY6 194 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 RPUSD4Q96CM3 377 aaKnown RBP5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 C17orf77Q96MU5 243 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 LINC01587Q99440 93 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 MGST2Q99735 147 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 TREM1Q9NP99 234 aa5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 ZNF331Q9NQX6 463 aaPredicted RBP5.48□□□□□ -1.53
HNRNPC-226ENST00000556628 TRAV12-2A0A075B6T6 113 aa5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 CTXND1A0A1B0GTU2 59 aa5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 TMEM218A2RU14 115 aa5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 CRXO43186 299 aaPredicted RBP5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 HTN1P15515 57 aa5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 M6PRP20645 277 aa5.47□□□□□ -1.53
HNRNPC-226ENST00000556628 TSPOP30536 169 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms