RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 TMUB2Q71RG4 321 aa12.28□□□□□ -0.44
PSEN1-217ENST00000556533 SSX7Q7RTT5 188 aa12.28□□□□□ -0.44
PSEN1-217ENST00000556533 CMTM2Q8TAZ6 248 aa12.28□□□□□ -0.44
PSEN1-217ENST00000556533 ZNF471Q9BX82 626 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-217ENST00000556533 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 NUPR2A6NF83 97 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 BCL2L11O43521 198 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 SPART-AS1P0CW21 52 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 RNASE4P34096 147 aaKnown RBP12.27□□□□□ -0.45
PSEN1-217ENST00000556533 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 TMEM256Q8N2U0 113 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 RXFP4Q8TDU9 374 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 ODF3Q96PU9 254 aa12.27□□□□□ -0.45
PSEN1-217ENST00000556533 AZU1P20160 251 aa12.26□□□□□ -0.45
PSEN1-217ENST00000556533 ZNF726P1Q15940 193 aa12.26□□□□□ -0.45
PSEN1-217ENST00000556533 TCTE3Q8IZS6 198 aa12.26□□□□□ -0.45
PSEN1-217ENST00000556533 KLK5Q9Y337 293 aaPredicted RBP12.26□□□□□ -0.45
PSEN1-217ENST00000556533 YTHDF2Q9Y5A9 579 aaKnown RBP12.26□□□□□ -0.45
PSEN1-217ENST00000556533 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 DIRC3C9JPN6 131 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 GPX1P07203 203 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 ZNF138P52744 262 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 TAS2R60P59551 318 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 C12orf74Q32Q52 190 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 FAM222AQ5U5X8 452 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 Q6ZTC4 211 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 Q8TAT8 98 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 TMEM167BQ9NRX6 74 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
PSEN1-217ENST00000556533 H7BYZ3 331 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 SLC25A5P05141 298 aaKnown RBP12.24□□□□□ -0.45
PSEN1-217ENST00000556533 FGF8P55075 233 aaPredicted RBP12.24□□□□□ -0.45
PSEN1-217ENST00000556533 CD300CQ08708 224 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 AKAP14Q86UN6 197 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 ZNF492Q9P255 531 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 STARD9Q9P2P6 4700 aa12.24□□□□□ -0.45
PSEN1-217ENST00000556533 CSMD3Q7Z407 3707 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 TENM2Q9NT68 2774 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 C7orf71A4D174 169 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 GNG5P63218 68 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 BTN1A1Q13410 526 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 GOLT1AQ6ZVE7 132 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 FAM19A4Q96LR4 140 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 C20orf144Q9BQM9 153 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 TMPRSS5Q9H3S3 457 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 DKK2Q9UBU2 259 aa12.23□□□□□ -0.45
PSEN1-217ENST00000556533 RBAKDNA6NC62 111 aa12.22□□□□□ -0.45
PSEN1-217ENST00000556533 FHITP49789 147 aa12.22□□□□□ -0.45
PSEN1-217ENST00000556533 UBE2G2P60604 165 aa12.22□□□□□ -0.45
PSEN1-217ENST00000556533 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
PSEN1-217ENST00000556533 EIF5AP63241 154 aaKnown RBP12.22□□□□□ -0.45
PSEN1-217ENST00000556533 LGALSLQ3ZCW2 172 aaPredicted RBP12.22□□□□□ -0.45
PSEN1-217ENST00000556533 CCDC28AQ8IWP9 274 aa12.22□□□□□ -0.45
PSEN1-217ENST00000556533 TRAV10A0A0B4J240 114 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 MAP1LC3B2A6NCE7 125 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 KLLNB2CW77 178 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 C11orf94C9JXX5 98 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 C1QBP02746 253 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 HTN3P15516 51 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 CRISP2P16562 243 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 C2CD4CQ8TF44 421 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 TMED6Q8WW62 240 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 MAP1LC3BQ9GZQ8 125 aa12.21□□□□□ -0.45
PSEN1-217ENST00000556533 KMT2CQ8NEZ4 4911 aaKnown RBP12.21□□□□□ -0.46
PSEN1-217ENST00000556533 A0A1B0GVG6 124 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 IGLL5B9A064 214 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 TPT1P13693 172 aaKnown RBP12.2□□□□□ -0.46
PSEN1-217ENST00000556533 PRR9Q5T870 116 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 ZFAND2AQ8N6M9 145 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 SGK494Q96LW2 274 aa12.2□□□□□ -0.46
PSEN1-217ENST00000556533 DEFB131BA0A096LNP1 70 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 TRAV8-1A0A0A6YYK1 113 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 LCE6AA0A183 80 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 TEX48A0A1B0GUV7 120 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 A0A1B0GV50 99 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 NMBP08949 121 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 DEFB130BP0DP73 79 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 DEFB130AP0DP74 79 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 DAD1P61803 113 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 Q6ZQT7 251 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 ZNF493Q6ZR52 646 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 STOML3Q8TAV4 291 aa12.19□□□□□ -0.46
PSEN1-217ENST00000556533 CBY3A6NI87 242 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 GGTLC3B5MD39 225 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 UMAD1C9J7I0 102 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 ZNF324O75467 553 aaPredicted RBP12.18□□□□□ -0.46
PSEN1-217ENST00000556533 IFNA7P01567 189 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 TMEM263Q8WUH6 116 aaKnown RBP12.18□□□□□ -0.46
PSEN1-217ENST00000556533 SFT2D1Q8WV19 159 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 PYGO2Q9BRQ0 406 aa12.18□□□□□ -0.46
PSEN1-217ENST00000556533 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
PSEN1-217ENST00000556533 EPDR1Q9UM22 224 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms