RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 MRPL53Q96EL3 112 aaKnown RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 PRR25Q96S07 402 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 NIPSNAP3BQ9BS92 247 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 AGPAT4-IT1Q9H0P7 198 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 MAP6D1Q9H9H5 199 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 C19orf73Q9NVV2 129 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 PSG8Q9UQ74 426 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 KNCNA6PVL3 124 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 NDUFS6O75380 124 aaKnown RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 GNG4P50150 75 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 RPL23P62829 140 aaKnown RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 FLI1Q01543 452 aaPredicted RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 HIST1H1AQ02539 215 aaPredicted RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 OR5I1Q13606 314 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 ADIRFQ15847 76 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 LINC01551Q86U37 167 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 TMEM75Q8N9X5 138 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 C8orf49Q96NF6 230 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 SDF2L1Q9HCN8 221 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 PRELID1Q9Y255 219 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 WIPF1O43516 503 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 LTAP01374 205 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 TMEM241Q24JQ0 296 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 BAGE2Q86Y30 109 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 OR8A1Q8NGG7 326 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 FMC1Q96HJ9 113 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 NAT8Q9UHE5 227 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 OR4C46A6NHA9 309 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 M0R036 132 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 SCO1O75880 301 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 S100A1P23297 94 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 SAMD5Q5TGI4 173 aa7.98□□□□□ -1.13
TDP1-211ENST00000555178 C9JCJ5 164 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 J3KRW8 73 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 MGST1P10620 155 aaKnown RBP7.97□□□□□ -1.13
TDP1-211ENST00000555178 KIR3DS1Q14943 382 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 PRR27Q6MZM9 219 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 LINC00322Q6ZN03 302 aaPredicted RBP7.97□□□□□ -1.13
TDP1-211ENST00000555178 Q6ZQT7 251 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 TRAV2A0A0B4J234 112 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 K7EQM0 130 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 CT45A10P0DMU9 189 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 TAS2R60P59551 318 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 FAM74A3Q4VXF1 159 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 ACTL10Q5JWF8 245 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 PRR9Q5T870 116 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 SAMD13Q5VXD3 122 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 Q8N1Y9 231 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 ZC2HC1AQ96GY0 325 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 MLST8Q9BVC4 326 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 CLEC5AQ9NY25 188 aa7.97□□□□□ -1.13
TDP1-211ENST00000555178 A0A0J9YX75 114 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 NPIPB6E9PJ23 425 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 INSL3P51460 131 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 TMEM78Q5T7P6 136 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 SVBPQ8N300 66 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 DEFB125Q8N687 156 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 CLRN3Q8NCR9 226 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 OR10J6PQ8NGY7 276 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 MCRIP2Q9BUT9 160 aaKnown RBP7.96□□□□□ -1.14
TDP1-211ENST00000555178 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.14
TDP1-211ENST00000555178 SERTM2A0A1B0GWG4 89 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 RBAKDNA6NC62 111 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 RBMY1BA6NDE4 496 aaKnown RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 RBMY1EA6NEQ0 496 aaKnown RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 RBMY1DP0C7P1 496 aaKnown RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 ZNF80P51504 273 aaPredicted RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 ARL6IP6Q8N6S5 226 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 OR4B1Q8NGF8 309 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 ISOC2Q96AB3 205 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 RNASE7Q9H1E1 156 aaKnown RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 SAV1Q9H4B6 383 aaPredicted RBP7.95□□□□□ -1.14
TDP1-211ENST00000555178 ZNF492Q9P255 531 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 CRIP1P50238 77 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 ZNF138P52744 262 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 EGFEM1PQ0D2K5 195 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 TMEM183AQ8IXX5 376 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 OR2K2Q8NGT1 345 aa7.95□□□□□ -1.14
TDP1-211ENST00000555178 OR11H12B2RN74 326 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 FXYD7P58549 80 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 FOXI2Q6ZQN5 318 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 TRBV6-1A0A0K0K1D8 114 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 C7orf77A4D0Y5 90 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 M0R2Z0 102 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 RNF212Q495C1 297 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
TDP1-211ENST00000555178 TRAV12-2A0A075B6T6 113 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 H3BMM0 161 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 SNAPINO95295 136 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 GCGP01275 180 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 S100A9P06702 114 aaKnown RBP7.93□□□□□ -1.14
TDP1-211ENST00000555178 HLA-DRB4P13762 266 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 PNRC1Q12796 327 aaPredicted RBP7.93□□□□□ -1.14
TDP1-211ENST00000555178 ZFAND2AQ8N6M9 145 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 FAM19A4Q96LR4 140 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 RPS10P5Q9NQ39 176 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms