RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ZNF546Q86UE3 836 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 KRTAP7-1Q8IUC3 87 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 C1orf158Q8N1D5 194 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 C12orf45Q8N5I9 185 aaPredicted RBP2.95□□□□□ -1.94
VTI1B-203ENST00000554636 OR10P1Q8NGE3 313 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 S100ZQ8WXG8 99 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 C2orf50Q96LR7 162 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 GPR82Q96P67 336 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 RSG1Q9BU20 258 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 GGACTQ9BVM4 153 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 ARL6Q9H0F7 186 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 SLC35B3Q9H1N7 401 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 ARV1Q9H2C2 271 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 NPVFQ9HCQ7 196 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 APLNQ9ULZ1 77 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 HIGD1AQ9Y241 93 aa2.95□□□□□ -1.94
VTI1B-203ENST00000554636 TRAV10A0A0B4J240 114 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 UBE2L5PA0A1B0GUS4 154 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 FAM240BA0A1B0GVZ2 78 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 IGSF23A1L1A6 192 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 C5orf51A6NDU8 294 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 C11orf94C9JXX5 98 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 L7N2F9 121 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 AGPAT2O15120 278 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 CRXO43186 299 aaPredicted RBP2.94□□□□□ -1.94
VTI1B-203ENST00000554636 OR5G3P0C626 314 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 IGLC2P0DOY2 106 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 RPL7P18124 248 aaKnown RBP2.94□□□□□ -1.94
VTI1B-203ENST00000554636 CXCL2P19875 107 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 CXCL3P19876 107 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 S100A7P31151 101 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 BCAP31P51572 246 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 CNN1P51911 297 aaKnown RBP2.94□□□□□ -1.94
VTI1B-203ENST00000554636 TCTAP57738 103 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 S100A10P60903 97 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF846Q147U1 533 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 OPCMLQ14982 345 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 FAM78BQ5VT40 261 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 MZT2BQ6NZ67 158 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 EBLN2Q6P2I7 272 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF767PQ75MW2 155 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 RPP25LQ8N5L8 163 aaKnown RBP2.94□□□□□ -1.94
VTI1B-203ENST00000554636 RNF182Q8N6D2 247 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 TMEM252Q8N6L7 170 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF738Q8NE65 137 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 OR11H7Q8NGC8 314 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 OR4B1Q8NGF8 309 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 TMEM37Q8WXS4 190 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 IGF2BP2-AS1Q96M15 143 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 RPRMQ9NS64 109 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 LYRM2Q9NU23 88 aaPredicted RBP2.94□□□□□ -1.94
VTI1B-203ENST00000554636 WDR83OSQ9Y284 106 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 GOLT1BQ9Y3E0 138 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 RFNGQ9Y644 331 aa2.94□□□□□ -1.94
VTI1B-203ENST00000554636 APOBP04114 4563 aaKnown RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 KIAA1109Q2LD37 5005 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 IGHV4-4A0A075B6R2 117 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 IGHV3OR16-12A0A075B7B8 117 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 DEFB131BA0A096LNP1 70 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 PLAC8L1A1L4L8 177 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 TMEM189A5PLL7 270 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 SMIM9A6NGZ8 99 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 IGLL5B9A064 214 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 BOLA2-SMG1P6H3BVE0 249 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 M0R2Z0 102 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 SLC17A3O00476 420 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 GOSR2O14653 212 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 COX7A2P2O60397 106 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 CST7O76096 145 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 DUSP14O95147 198 aaKnown RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 SIX6O95475 246 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 INSP01308 110 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 HBE1P02100 147 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 PRB4P10163 310 aaPredicted RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 CAMLGP49069 296 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 SULT1A1P50225 295 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 CAV2P51636 162 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 HIST1H1AQ02539 215 aaPredicted RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 FGL1Q08830 312 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 SPINK13Q1W4C9 94 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 MIC13Q5XKP0 118 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 LCN15Q6UWW0 184 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 LINC00305Q7Z4B0 112 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 NRARPQ7Z6K4 114 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 BAP18Q8IXM2 172 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 OR8A1Q8NGG7 326 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 ENKURQ8TC29 256 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 RNF126Q9BV68 326 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 ZNF331Q9NQX6 463 aaPredicted RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 UQCC1Q9NVA1 299 aa2.93□□□□□ -1.94
VTI1B-203ENST00000554636 YTHDF2Q9Y5A9 579 aaKnown RBP2.93□□□□□ -1.94
VTI1B-203ENST00000554636 NACAE9PAV3 2078 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 PKD1P98161 4303 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 TRAV12-2A0A075B6T6 113 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 TRAV5A0A0B4J249 113 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 IGKV3D-20A0A0C4DH25 116 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 TEX48A0A1B0GUV7 120 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 INMT-MINDY4F8WBC2 141 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 H3BQ15 152 aa2.92□□□□□ -1.94
VTI1B-203ENST00000554636 H3BTX0 84 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms