RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
TDP1-208ENST00000553989 TAS2R60P59551 318 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 ZNF90Q03938 601 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 IQCJQ1A5X6 159 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 SPINK9Q5DT21 86 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 FAM78BQ5VT40 261 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 GFI1BQ5VTD9 330 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 Q6ZWC4 215 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 STPG3Q8N7X2 389 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 OCC1Q8TAD7 63 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
TDP1-208ENST00000553989 CHRDL1Q9BU40 450 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 MRPL32Q9BYC8 188 aaKnown RBP6.57□□□□□ -1.36
TDP1-208ENST00000553989 COMMD5Q9GZQ3 224 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 CDIP1Q9H305 208 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
TDP1-208ENST00000553989 TRAV3A0A0B4J244 114 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 OR2T8A6NH00 312 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 AMBPP02760 352 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 MT-ND6P03923 174 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 DDTP30046 118 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 ATP5G3P48201 142 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 UBE2G2P60604 165 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 SSTP61278 116 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 SELENOTP62341 195 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 TIGITQ495A1 244 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 ETFRF1Q6IPR1 90 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 WDR73Q6P4I2 378 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 WFDC3Q8IUB2 231 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 STXBP6Q8NFX7 210 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 OR1L4Q8NGR5 311 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 ZNF502Q8TBZ5 544 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 DNAJC4Q9NNZ3 241 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 OSTCQ9NRP0 149 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 TP53TG1Q9Y2A0 90 aa6.56□□□□□ -1.36
TDP1-208ENST00000553989 IGHV3OR16-8A0A075B7F1 116 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 IGHV3-21A0A0B4J1V1 117 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 OR4C46A6NHA9 309 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 C8orf88P0DMB2 117 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 GZMBP10144 247 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 ESDP10768 282 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 OR10J1P30954 320 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 RANP62826 216 aaKnown RBP6.55□□□□□ -1.36
TDP1-208ENST00000553989 Q0VG73 95 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 PDZD11Q5EBL8 140 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 GCSAMLQ5JQS6 135 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 GBGT1Q8N5D6 347 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 HINT2Q9BX68 163 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 GNB1LQ9BYB4 327 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 DAZ1Q9NQZ3 744 aaKnown RBP6.55□□□□□ -1.36
TDP1-208ENST00000553989 ALMS1Q8TCU4 4167 aa6.55□□□□□ -1.36
TDP1-208ENST00000553989 KIR2DL5BA0A0G2JN68 375 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 KIR2DL5BA0A0G2JPC4 375 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 IGLC7A0M8Q6 106 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 CGB1A6NKQ9 187 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 ISLRO14498 428 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 ZNF207O43670 478 aaKnown RBP6.54□□□□□ -1.36
TDP1-208ENST00000553989 OR5G3P0C626 314 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 GNG4P50150 75 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 GAMTQ14353 236 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 Q56UQ5 140 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 KIR2DL5AQ8N109 375 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 VN1R17PQ8TDU5 208 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 PHLDA1Q8WV24 401 aaPredicted RBP6.54□□□□□ -1.36
TDP1-208ENST00000553989 RNF183Q96D59 192 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 NDUFA4L2Q9NRX3 87 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 C21orf62Q9NYP8 219 aa6.54□□□□□ -1.36
TDP1-208ENST00000553989 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 ZNF705GA8MUZ8 300 aaPredicted RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 NDUFA4O00483 81 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 RNASE2P10153 161 aaKnown RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 FCGR2BP31994 310 aaPredicted RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 TFPI2P48307 235 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 ERVFC1-1P60608 527 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 RAB4BP61018 213 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 KLK9Q2XQG4 91 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 RASL11AQ6T310 242 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 MRPL52Q86TS9 123 aaKnown RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 SRSF8Q9BRL6 282 aaKnown RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 SEPSECSQ9HD40 501 aaKnown RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 KLK9Q9UKQ9 250 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 YTHDF2Q9Y5A9 579 aaKnown RBP6.53□□□□□ -1.36
TDP1-208ENST00000553989 X6R8D5 127 aa6.53□□□□□ -1.36
TDP1-208ENST00000553989 SCO2A0A1W2PP80 73 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 SCGB1D1O95968 90 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 CRISP2P16562 243 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 C1orf194Q5T5A4 169 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 FAM162BQ5T6X4 162 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 FAM231DQ6ZW35 169 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 LINC00469Q8N7U9 141 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 SMIM12Q96EX1 92 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 C14orf144Q96I85 54 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 C2orf88Q9BSF0 95 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 NDUFAF3Q9BU61 184 aa6.52□□□□□ -1.37
TDP1-208ENST00000553989 MAP6D1Q9H9H5 199 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms