RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 FAM201AQ5SY85 155 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 TMEM200BQ69YZ2 307 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 MORN3Q6PF18 240 aaPredicted RBP3.91□□□□□ -1.78
LMO3-229ENST00000543721 TTTY13Q9BZ97 58 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 GAGE2DQ9UEU5 116 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 LOC107984156A0A0G2JMH3 177 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 SRD5A1P18405 259 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 XGP55808 180 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 TMEM78Q5T7P6 136 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 ARL17AQ8IVW1 177 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 C9orf106Q8NAJ2 232 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 FAM110AQ9BQ89 295 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 SPXQ9BT56 116 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 SIT1Q9Y3P8 196 aa3.91□□□□□ -1.78
LMO3-229ENST00000543721 IGLV2-18A0A075B6J9 118 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 RBAKDNA6NC62 111 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE12JA6NER3 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 SNCGO76070 127 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE7O76087 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 PPP1R17O96001 155 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE12FP0CL80 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE12GP0CL81 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE12IP0CL82 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 MFAP4P55083 255 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 GAGE4Q13068 117 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 TTC32Q5I0X7 151 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 NCOR1O75376 2440 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 DSCAMO60469 2012 aa3.9□□□□□ -1.78
LMO3-229ENST00000543721 IGHV3-21A0A0B4J1V1 117 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 TEX22C9J3V5 150 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 C16orf97H3BN30 126 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 M0R3E3 92 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 RHODO00212 210 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 CCL3L1P16619 93 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 MRPL23Q16540 153 aaKnown RBP3.9□□□□□ -1.79
LMO3-229ENST00000543721 MRGPRG-AS1Q2M3A8 158 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 DUX4L9Q6RFH8 374 aaPredicted RBP3.9□□□□□ -1.79
LMO3-229ENST00000543721 SCGB1D4Q6XE38 83 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 IL17RELQ6ZVW7 336 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 ZNRD1Q9P1U0 126 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 PRSS29PA6NIE9 313 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 NDUFA3O95167 84 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 ZNF883P0CG24 379 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 CD59P13987 128 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 MSMPQ1L6U9 139 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 DTX2Q86UW9 622 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 C17orf77Q96MU5 243 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 SLC50A1Q9BRV3 221 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 ZNF576Q9H609 170 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 TPSG1Q9NRR2 321 aa3.9□□□□□ -1.79
LMO3-229ENST00000543721 HEATR1Q9H583 2144 aaKnown RBP3.9□□□□□ -1.79
LMO3-229ENST00000543721 LGALS1P09382 135 aaKnown RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 SPRNQ5BIV9 151 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 SCGB3A1Q96QR1 104 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 CITED1Q99966 193 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 FBXL15Q9H469 300 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 UFC1Q9Y3C8 167 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 APC2O95996 2303 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 IGHV4-4A0A075B6R2 117 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 TRAV17A0A0B4J275 112 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 ZNF815PA8K554 130 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 CNIH1O95406 144 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 CLEC3BP05452 202 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 TMEM155Q4W5P6 130 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 NUP37Q8NFH4 326 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 HIF1ANQ9NWT6 349 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 KAAG1Q9UBP8 84 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 SS18L2Q9UHA2 77 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 KNTC1P50748 2209 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 MBD3L4A6NDZ8 208 aaPredicted RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 MBD3L3A6NE82 208 aaPredicted RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 MBD3L5A6NJ08 208 aaPredicted RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 K7EIM0 57 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 IGHV1-8P0DP01 117 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 IFITM1P13164 125 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 ZNF672Q499Z4 452 aaPredicted RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 MBD3L2Q8NHZ7 208 aaPredicted RBP3.89□□□□□ -1.79
LMO3-229ENST00000543721 TOMM6Q96B49 74 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 CARD19Q96LW7 228 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 SMIM2Q9BVW6 85 aa3.89□□□□□ -1.79
LMO3-229ENST00000543721 PRR14LQ5THK1 2151 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 IGKV2-40A0A087WW87 121 aaPredicted RBP3.88□□□□□ -1.79
LMO3-229ENST00000543721 TRBV7-9A0A0J9YWB2 115 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 B5MCH6 92 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 IGKV2D-40P01614 121 aaPredicted RBP3.88□□□□□ -1.79
LMO3-229ENST00000543721 IGHG4P01861 327 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 HLA-DMBP28068 263 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 LINC01600Q96MT4 127 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 C17orf100A8MU93 164 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 DLX6P56179 175 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
LMO3-229ENST00000543721 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 NDUFA11Q86Y39 141 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 TDHQ8IZJ6 230 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 C10orf126Q8N4M7 172 aa3.88□□□□□ -1.79
LMO3-229ENST00000543721 NRACQ8N912 160 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms