RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 EVI2AP22794 236 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 ZNF80P51504 273 aaPredicted RBP6.77□□□□□ -1.33
UBE3B-208ENST00000538070 BLCAPP62952 87 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 ATP5G2Q06055 141 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 Q6ZQT7 251 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 DUX5Q96PT3 197 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 MIEN1Q9BRT3 115 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 LOC102724200A0A096LPH7 203 aaPredicted RBP6.77□□□□□ -1.33
UBE3B-208ENST00000538070 WI2-2373I1.2A0A1W2PRP0 233 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 FAM106AQ4KMX7 169 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 IL17RELQ6ZVW7 336 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 C18orf15Q96N68 181 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 PIMREGQ9BSJ6 248 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 NDFIP1Q9BT67 221 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 PRSS22Q9GZN4 317 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 HIF1ANQ9NWT6 349 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 ZFP30Q9Y2G7 519 aa6.77□□□□□ -1.33
UBE3B-208ENST00000538070 OR4C46A6NHA9 309 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 Q5PR19 223 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 TEX43Q6ZNM6 134 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 SMAD5-AS1Q9Y6J3 95 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 IGHV1-24A0A0C4DH33 117 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 CKS2P33552 79 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 IFI27P40305 119 aaPredicted RBP6.76□□□□□ -1.33
UBE3B-208ENST00000538070 PSG9Q00887 426 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 Q6ZS46 218 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 SPATA12Q7Z6I5 190 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 OR4B1Q8NGF8 309 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 METTL26Q96S19 204 aa6.76□□□□□ -1.33
UBE3B-208ENST00000538070 TRAV41A0A0B4J266 112 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 EEF1AKMT3Q96AZ1 226 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 TMEM70Q9BUB7 260 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 A0A1B0GXF2 115 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 IGKV3-20P01619 116 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 SFTPCP11686 197 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 ATP5L2Q7Z4Y8 100 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 LURAP1LQ8IV03 231 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 PRR25Q96S07 402 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 TEX15Q9BXT5 2789 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 KIR2DL5BA0A0G2JN68 375 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 KIR2DL5BA0A0G2JPC4 375 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 ARL3P36405 182 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 DNLZQ5SXM8 178 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 KIR2DL5AQ8N109 375 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 ZNF738Q8NE65 137 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 URB1-AS1Q96HZ7 61 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 SRSF8Q9BRL6 282 aaKnown RBP6.75□□□□□ -1.33
UBE3B-208ENST00000538070 KLK15Q9H2R5 256 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 PRORYQ9H606 182 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 AP5S1Q9NUS5 200 aa6.75□□□□□ -1.33
UBE3B-208ENST00000538070 PRRC2AP48634 2157 aaKnown RBP6.75□□□□□ -1.33
UBE3B-208ENST00000538070 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 LOXL1Q08397 574 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-208ENST00000538070 HIST2H2BDQ6DRA6 164 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 FER1L6-AS1Q8NA97 138 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 FAM110DQ8TAY7 271 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-208ENST00000538070 CCDC140Q96MF4 163 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 OR5AL1P0C617 328 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 GATA1P15976 413 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-208ENST00000538070 Q8N6K4 173 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 ZNF502Q8TBZ5 544 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 F6UB75 175 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 ESDP10768 282 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 IGLL1P15814 213 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 TMEM78Q5T7P6 136 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 C1orf122Q6ZSJ8 110 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 Q8N976 141 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 WIPF2Q8TF74 440 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-208ENST00000538070 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
UBE3B-208ENST00000538070 IGHV1-69DA0A0B4J2H0 117 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 OOSP1A8MZH6 123 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 MRPS12O15235 138 aaKnown RBP6.73□□□□□ -1.33
UBE3B-208ENST00000538070 IGHV1-69P01742 117 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 UNQ9165/PRO28630Q6UXU0 137 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 UQCR10Q9UDW1 63 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 C20orf202A1L168 122 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 IGF1P05019 195 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 PAX8Q06710 450 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 RASL11AQ6T310 242 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 C2orf88Q9BSF0 95 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 GAS8-AS1O95177 125 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 TGFAP01135 160 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 RPLP1P05386 114 aaKnown RBP6.73□□□□□ -1.33
UBE3B-208ENST00000538070 NUTF2P61970 127 aaKnown RBP6.73□□□□□ -1.33
UBE3B-208ENST00000538070 SAPCD1Q5SSQ6 148 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 KLHDC1Q8N7A1 406 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 C5orf56Q8N8D9 126 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 MOB4Q9Y3A3 225 aa6.73□□□□□ -1.33
UBE3B-208ENST00000538070 TRAV26-2A0A0B4J265 109 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 BUB3O43684 328 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 IGLC3P0DOY3 106 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 PAX2Q02962 417 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 FOXE3Q13461 319 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 LYPD1Q8N2G4 141 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 CBY1Q9Y3M2 126 aa6.72□□□□□ -1.33
UBE3B-208ENST00000538070 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms