RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 S100A10P60903 97 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 CD300CQ08708 224 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 BTN1A1Q13410 526 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 RAB32Q13637 225 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 TTC32Q5I0X7 151 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 GCSAMLQ5JQS6 135 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 MAPKAPK5-AS1Q8N8E1 139 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 C11orf72Q8NBR9 251 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 CHAC2Q8WUX2 184 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 MRPL53Q96EL3 112 aaKnown RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 FAM19A4Q96LR4 140 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 Q9H3A6 140 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 LYRM2Q9NU23 88 aaPredicted RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 TMEM14CQ9P0S9 112 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 MRPS16Q9Y3D3 137 aaKnown RBP5.83□□□□□ -1.48
USP28-203ENST00000537490 KLF12Q9Y4X4 402 aa5.83□□□□□ -1.48
USP28-203ENST00000537490 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 TRGV2A0A075B6R0 118 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 A0A1W2PPQ1 181 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 KLLNB2CW77 178 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 H2AFB2P0C5Z0 115 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 PVALBP20472 110 aaPredicted RBP5.82□□□□□ -1.48
USP28-203ENST00000537490 FGF7P21781 194 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 RNASE4P34096 147 aaKnown RBP5.82□□□□□ -1.48
USP28-203ENST00000537490 ANXA2RQ3ZCQ2 193 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 Q6ZQT7 251 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 EXOC3-AS1Q8N2X6 119 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 BLNKQ8WV28 456 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 C18orf15Q96N68 181 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 LINC00467Q9BRT7 94 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 NUDT15Q9NV35 164 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 PRELID1Q9Y255 219 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 TIMM9Q9Y5J7 89 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 HSPG2P98160 4391 aa5.82□□□□□ -1.48
USP28-203ENST00000537490 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
USP28-203ENST00000537490 TRGV1A0A0A0MS02 117 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 SPINK4O60575 86 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 IGKV2D-40P01614 121 aaPredicted RBP5.81□□□□□ -1.48
USP28-203ENST00000537490 CRISP2P16562 243 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 BTF3P20290 206 aaKnown RBP5.81□□□□□ -1.48
USP28-203ENST00000537490 TCL1AP56279 114 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 HBG1P69891 147 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 HBG2P69892 147 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 NHLH2Q02577 135 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 ICAM4Q14773 271 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 ATP6V1FQ16864 119 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 PRR9Q5T870 116 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 C9orf47Q6ZRZ4 202 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 STX12Q86Y82 276 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 EIF4E3Q8N5X7 224 aaKnown RBP5.81□□□□□ -1.48
USP28-203ENST00000537490 ZFAND2AQ8N6M9 145 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 ZNF680Q8NEM1 530 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 FAM167A-AS1Q96KT0 104 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 VGLL1Q99990 258 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 SLC25A2Q9BXI2 301 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 GPN1Q9HCN4 374 aaPredicted RBP5.81□□□□□ -1.48
USP28-203ENST00000537490 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 FUT9Q9Y231 359 aa5.81□□□□□ -1.48
USP28-203ENST00000537490 MPDU1O75352 247 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 IGHV3-53P01767 116 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 GPX1P07203 203 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 NBEAP1P0C6P0 100 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 LINC00315P59091 139 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 PDE6HQ13956 83 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 FAM122CQ6P4D5 195 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 MIR17HGQ75NE6 70 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 Q8N1X5 172 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 NPCDR1Q9BY65 106 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 ZNF492Q9P255 531 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
USP28-203ENST00000537490 IGHV1OR15-1A0A075B7D0 117 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 FAM240BA0A1B0GVZ2 78 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 SIVA1O15304 175 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 PAX4O43316 350 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 SIX6O95475 246 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 IBA57Q5T440 356 aaKnown RBP5.79□□□□□ -1.48
USP28-203ENST00000537490 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
USP28-203ENST00000537490 OR5C1Q8NGR4 320 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 THAP6Q8TBB0 222 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 ST6GAL2Q96JF0 529 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 CCDC32Q9BV29 185 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 OR51M1Q9H341 326 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 AAMDCQ9H7C9 122 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 SCRT2Q9NQ03 307 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 MRPL16Q9NX20 251 aaKnown RBP5.79□□□□□ -1.48
USP28-203ENST00000537490 TNFRSF18Q9Y5U5 241 aa5.79□□□□□ -1.48
USP28-203ENST00000537490 H0YIZ8 118 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 RGS13O14921 159 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 PRAF2O60831 178 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 NXPH4O95158 308 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 NMBP08949 121 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 OR10J4P0C629 311 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 FUSP35637 526 aaKnown RBP eCLIP5.78□□□□□ -1.48
USP28-203ENST00000537490 CRYBA4P53673 196 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 FHL2Q14192 279 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 TMEM78Q5T7P6 136 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 Q8TAT8 98 aa5.78□□□□□ -1.48
USP28-203ENST00000537490 FXYD5Q96DB9 178 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms