RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KIR2DL5BQ8NHK3 375 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 C11orf1Q9H5F2 150 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 SLC25A22Q9H936 323 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 RETNQ9HD89 108 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 UQCC1Q9NVA1 299 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 DOK5Q9P104 306 aa4.25□□□□□ -1.73
HMGB1P42-201ENST00000532126 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 A0A1B0GVG6 124 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 ZNF98A6NK75 572 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 AGPAT2O15120 278 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PET100P0DJ07 73 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 GALR1P47211 349 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 HNRNPA3P51991 378 aaKnown RBP4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 CEBPGP53567 150 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR5I1Q13606 314 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 ATP6V1FQ16864 119 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PSMG4Q5JS54 123 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 SOHLH1Q5JUK2 328 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PXDC1Q5TGL8 231 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 SAMD13Q5VXD3 122 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 S100A7AQ86SG5 101 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PPP1R1CQ8WVI7 109 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PCNPQ8WW12 178 aaKnown RBP4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 GPR82Q96P67 336 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 MGST2Q99735 147 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 SHANK2-AS3Q9BTD1 123 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 SCRT1Q9BWW7 348 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 SLC25A31Q9H0C2 315 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 ARL6Q9H0F7 186 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR5AC2Q9NZP5 309 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 HIGD1AQ9Y241 93 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 ALG5Q9Y673 324 aa4.24□□□□□ -1.73
HMGB1P42-201ENST00000532126 UBE2L5PA0A1B0GUS4 154 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 KNCNA6PVL3 124 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 SNAI2O43623 268 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 COX7A2P2O60397 106 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 PRSS2P07478 247 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 RPL7P18124 248 aaKnown RBP4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 PSMB3P49720 205 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 MEOX2P50222 304 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 BAXQ07812 192 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 OXA1LQ15070 435 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 DEFB135Q30KP9 77 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 ACTL10Q5JWF8 245 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 SSX7Q7RTT5 188 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR5C1Q8NGR4 320 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 GATAD1Q8WUU5 269 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 LINC00052Q96N35 136 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 OVOL2Q9BRP0 275 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 RSG1Q9BU20 258 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 SLC25A39Q9BZJ4 359 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 MED28Q9H204 178 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 ARV1Q9H2C2 271 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 TP53TG1Q9Y2A0 90 aa4.23□□□□□ -1.73
HMGB1P42-201ENST00000532126 H3BRN7 92 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 ISLRO14498 428 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 SOCS3O14543 225 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 PPP1R2P9O14990 202 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 MPDU1O75352 247 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 MPC2O95563 127 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 CXCL3P19876 107 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 FGF7P21781 194 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 XGP55808 180 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 CLINT1Q14677 625 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 FCN2Q15485 313 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 C10orf113Q5VZT2 155 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 MIC13Q5XKP0 118 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 MORN3Q6PF18 240 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 LINC00305Q7Z4B0 112 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 TRPT1Q86TN4 253 aaKnown RBP4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 OR10G8Q8NGN5 311 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 MUC7Q8TAX7 377 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 RNF126Q9BV68 326 aa4.22□□□□□ -1.73
HMGB1P42-201ENST00000532126 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 H3BMM0 161 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 C3orf84H3BNL1 204 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 SMLR1H3BR10 107 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 RPL12P30050 165 aaKnown RBP4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 RPL29P47914 159 aaKnown RBP4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 NUTF2P61970 127 aaKnown RBP4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 EBLN2Q6P2I7 272 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 PATE2Q6UY27 113 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 FOXI2Q6ZQN5 318 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF709Q8N972 641 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 ZNF738Q8NE65 137 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 OR11H7Q8NGC8 314 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 PFDN5Q99471 154 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 NPCDR1Q9BY65 106 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 KCNIP2Q9NS61 270 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 RPRMQ9NS64 109 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 SLC39A9Q9NUM3 307 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 PXMP4Q9Y6I8 212 aa4.21□□□□□ -1.74
HMGB1P42-201ENST00000532126 C17orf112F2Z3M2 114 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 IFNA5P01569 189 aa4.2□□□□□ -1.74
HMGB1P42-201ENST00000532126 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms