RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 SLC25A5P05141 298 aaKnown RBP10.6□□□□□ -0.71
MRPS28-209ENST00000522987 DAZ2Q13117 558 aaKnown RBP10.6□□□□□ -0.71
MRPS28-209ENST00000522987 GUK1Q16774 197 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 PRR9Q5T870 116 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 FAM122CQ6P4D5 195 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 PFDN5Q99471 154 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 NUDT15Q9NV35 164 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 TIMM9Q9Y5J7 89 aa10.6□□□□□ -0.71
MRPS28-209ENST00000522987 LYRM1O43325 122 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 TCRBP04435 133 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 RAB32Q13637 225 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 ICAM4Q14773 271 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 EIF4E3Q8N5X7 224 aaKnown RBP10.59□□□□□ -0.71
MRPS28-209ENST00000522987 C2orf50Q96LR7 162 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 VGLL1Q99990 258 aa10.59□□□□□ -0.71
MRPS28-209ENST00000522987 GPN1Q9HCN4 374 aaPredicted RBP10.59□□□□□ -0.71
MRPS28-209ENST00000522987 H3BNG1 76 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 ZNF324O75467 553 aaPredicted RBP10.58□□□□□ -0.72
MRPS28-209ENST00000522987 NXPH4O95158 308 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 GPX1P07203 203 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 PVALBP20472 110 aaPredicted RBP10.58□□□□□ -0.72
MRPS28-209ENST00000522987 RPL29P47914 159 aaKnown RBP10.58□□□□□ -0.72
MRPS28-209ENST00000522987 SULT1A1P50225 295 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 C12orf45Q8N5I9 185 aaPredicted RBP10.58□□□□□ -0.72
MRPS28-209ENST00000522987 TMEM252Q8N6L7 170 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 ZNF680Q8NEM1 530 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 DNAH5Q8TE73 4624 aa10.58□□□□□ -0.72
MRPS28-209ENST00000522987 A0A1W2PPQ1 181 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 KLLNB2CW77 178 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 RGS13O14921 159 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 SIVA1O15304 175 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 PAX4O43316 350 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 MPDU1O75352 247 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 HIST1H1EP10412 219 aaKnown RBP10.57□□□□□ -0.72
MRPS28-209ENST00000522987 VWC2Q2TAL6 325 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 MIR17HGQ75NE6 70 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 Q8TAT8 98 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 THAP6Q8TBB0 222 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 C8orf49Q96NF6 230 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 SLC25A2Q9BXI2 301 aa10.57□□□□□ -0.72
MRPS28-209ENST00000522987 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
MRPS28-209ENST00000522987 SPINK4O60575 86 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 ZNF253O75346 499 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 BTF3P20290 206 aaKnown RBP10.56□□□□□ -0.72
MRPS28-209ENST00000522987 TCL1AP56279 114 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 Q6ZRN7 208 aaPredicted RBP10.56□□□□□ -0.72
MRPS28-209ENST00000522987 STX12Q86Y82 276 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 MRPL53Q96EL3 112 aaKnown RBP10.56□□□□□ -0.72
MRPS28-209ENST00000522987 FAM19A4Q96LR4 140 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 TMEM14CQ9P0S9 112 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 ICOSQ9Y6W8 199 aa10.56□□□□□ -0.72
MRPS28-209ENST00000522987 PRAF2O60831 178 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 OR10J4P0C629 311 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 DNAH10OSP0CZ25 163 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 S100A11P31949 105 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 HBG1P69891 147 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 HBG2P69892 147 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 CNPY1Q3B7I2 92 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 ANXA2RQ3ZCQ2 193 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 TMEM78Q5T7P6 136 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 ZFAND2AQ8N6M9 145 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 AAMDCQ9H7C9 122 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 PRELID1Q9Y255 219 aa10.55□□□□□ -0.72
MRPS28-209ENST00000522987 SIX6O95475 246 aa10.54□□□□□ -0.72
MRPS28-209ENST00000522987 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
MRPS28-209ENST00000522987 NHLH2Q02577 135 aa10.54□□□□□ -0.72
MRPS28-209ENST00000522987 ARPC5LQ9BPX5 153 aa10.54□□□□□ -0.72
MRPS28-209ENST00000522987 NPCDR1Q9BY65 106 aa10.54□□□□□ -0.72
MRPS28-209ENST00000522987 IGHV1OR15-1A0A075B7D0 117 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 E5RGE8 158 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 IL15RAQ13261 267 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 C9orf47Q6ZRZ4 202 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 PHYHIPLQ96FC7 376 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 ST6GAL2Q96JF0 529 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 FAM167A-AS1Q96KT0 104 aa10.53□□□□□ -0.72
MRPS28-209ENST00000522987 EIF3GO75821 320 aaKnown RBP eCLIP10.52□□□□□ -0.73
MRPS28-209ENST00000522987 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 CRISP2P16562 243 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 CRYBA4P53673 196 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 PDE6HQ13956 83 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 FHL2Q14192 279 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 LYPD5Q6UWN5 251 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 OR5C1Q8NGR4 320 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 C18orf15Q96N68 181 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 ZNF492Q9P255 531 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
MRPS28-209ENST00000522987 TRGV4A0A0C4DH28 118 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 EPM2AB3EWF7 344 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 ZNF415Q09FC8 603 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 ATP6V1FQ16864 119 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 LRRC37A5PQ49AS3 106 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
MRPS28-209ENST00000522987 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
MRPS28-209ENST00000522987 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms