RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 RPS4Y1P22090 263 aaKnown RBP2.5□□□□□ -2.01
RFC1-216ENST00000514572 CD24P25063 80 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 GUCA1AP43080 201 aaPredicted RBP2.5□□□□□ -2.01
RFC1-216ENST00000514572 TAS2R30P59541 319 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 PSME3P61289 254 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 MRPS25P82663 173 aaKnown RBP2.5□□□□□ -2.01
RFC1-216ENST00000514572 GLO1Q04760 184 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 KCNJ8Q15842 424 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 BRD3OSQ6XYD6 125 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 ZCCHC23Q6ZST2 131 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 ZNF283Q8N7M2 679 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 OR8B3Q8NGG8 313 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 DCSTAMPQ9H295 470 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 GLTPQ9NZD2 209 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 MINOS1-NBL1R4GNA1 71 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 LYSTQ99698 3801 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 C3orf84H3BNL1 204 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 UBE2L6O14933 153 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 S100A3P33764 101 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 FUSP35637 526 aaKnown RBP eCLIP2.49□□□□□ -2.01
RFC1-216ENST00000514572 CD200P41217 278 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 RPL27AP46776 148 aaKnown RBP2.49□□□□□ -2.01
RFC1-216ENST00000514572 XCL1P47992 114 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 SRP9P49458 86 aaKnown RBP2.49□□□□□ -2.01
RFC1-216ENST00000514572 PCBD1P61457 104 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 NCALDP61601 193 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 POLR2GP62487 172 aaKnown RBP eCLIP2.49□□□□□ -2.01
RFC1-216ENST00000514572 EMX2Q04743 252 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 GUK1Q16774 197 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 TMEM97Q5BJF2 176 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 DEFB121Q5J5C9 76 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 CLECL1Q8IZS7 167 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 OR5J2Q8NH18 312 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 CCDC115Q96NT0 180 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 TSPAN32Q96QS1 320 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 NMNAT3Q96T66 252 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 OR2J1Q9GZK6 312 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 PKIGQ9Y2B9 76 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 TNCP24821 2201 aa2.49□□□□□ -2.01
RFC1-216ENST00000514572 A0A1B0GWA3 101 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 C5orf58C9J3I9 102 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 NDUFA2O43678 99 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 NPYP01303 97 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 ZNF728P0DKX0 622 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 ARF6P62330 175 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 RUNX1Q01196 453 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 ZNF181Q2M3W8 571 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 PABPC1L2AQ5JQF8 200 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 LPCAT3Q6P1A2 487 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 LRRC18Q8N456 261 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 OR4X1Q8NH49 305 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 SLC25A40Q8TBP6 338 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 C20orf166-AS1Q96NR2 134 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 PRELID3BQ9Y3B1 194 aa2.48□□□□□ -2.01
RFC1-216ENST00000514572 NOP16Q9Y3C1 178 aaKnown RBP2.48□□□□□ -2.01
RFC1-216ENST00000514572 IGKV1D-42A0A075B6H8 117 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 PRORSD1PA6NEY8 169 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 TMEM235A6NFC5 223 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 CNIH1O95406 144 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 BLVRBP30043 206 aaPredicted RBP2.47□□□□□ -2.01
RFC1-216ENST00000514572 S100A5P33763 92 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 HIST1H3AP68431 136 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 TNFRSF9Q07011 255 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 IAH1Q2TAA2 248 aaPredicted RBP2.47□□□□□ -2.01
RFC1-216ENST00000514572 C10orf128Q5T292 105 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 FAM27BQ5VT28 67 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 NDUFA11Q86Y39 141 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 OR5C1Q8NGR4 320 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 DGCR14Q96DF8 476 aaKnown RBP2.47□□□□□ -2.01
RFC1-216ENST00000514572 ERMAPQ96PL5 475 aaPredicted RBP2.47□□□□□ -2.01
RFC1-216ENST00000514572 TTTY13Q9BZ97 58 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 BCL2L10Q9HD36 194 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 SOX21Q9Y651 276 aaPredicted RBP2.47□□□□□ -2.01
RFC1-216ENST00000514572 BIRC6Q9NR09 4857 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
RFC1-216ENST00000514572 TRAV38-1A0A0B4J264 116 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 A0A0J9YX75 114 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 KNCNA6PVL3 124 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
RFC1-216ENST00000514572 CST2P09228 141 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 PPIBP23284 216 aaKnown RBP2.46□□□□□ -2.02
RFC1-216ENST00000514572 ALDH3A1P30838 453 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 RPL5P46777 297 aaKnown RBP2.46□□□□□ -2.02
RFC1-216ENST00000514572 TAS2R20P59543 309 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 KIAA2026Q5HYC2 2103 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 DHRS4L2Q6PKH6 230 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 ZNF676Q8N7Q3 588 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 WFDC9Q8NEX5 89 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 OR4C16Q8NGL9 310 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 C10orf82Q8WW14 230 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 ANP32BQ92688 251 aaKnown RBP2.46□□□□□ -2.02
RFC1-216ENST00000514572 OR2H1Q9GZK4 316 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 TPT1P8Q9HAU6 139 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 IDI2-AS1Q9NZ38 188 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 ATPIF1Q9UII2 106 aa2.46□□□□□ -2.02
RFC1-216ENST00000514572 EPPK1P58107 5090 aaKnown RBP2.46□□□□□ -2.02
RFC1-216ENST00000514572 OR4C46A6NHA9 309 aa2.45□□□□□ -2.02
RFC1-216ENST00000514572 IQCF6A8MYZ5 107 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms