RNA–Protein interactions for RNA: ENST00000511551.2

SCAMP1-204, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 4

Gene SCAMP1, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-204ENST00000511551 RPSAP08865 295 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 RNASE3P12724 160 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ASIPP42127 132 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 OMPP47874 163 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 CEBPGP53567 150 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 RPS20P60866 119 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 STX5Q13190 355 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF345Q14585 488 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 KCNJ8Q15842 424 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 SPANXN3Q5MJ09 141 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF826PQ6ZT77 177 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TRAPPC5Q8IUR0 188 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ZNF565Q8N9K5 539 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 ST6GALNAC3Q8NDV1 305 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 OR8B3Q8NGG8 313 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TERB2Q8NHR7 220 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 TOMM6Q96B49 74 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 C8orf76Q96K31 380 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 PRAP1Q96NZ9 151 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 C20orf27Q9GZN8 174 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 C11orf68Q9H3H3 251 aaKnown RBP0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 MED29Q9NX70 200 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 SCN3AQ9NY46 2000 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 MYH1P12882 1939 aa0.72□□□□□ -2.29
SCAMP1-204ENST00000511551 USH2AO75445 5202 aa0.71□□□□□ -2.29
SCAMP1-204ENST00000511551 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 LRP1Q07954 4544 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 FAM236DA0A1B0GTK5 79 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 EXOC1LA0A1B0GW35 172 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 SMIM9A6NGZ8 99 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 BUB1B-PAK6H3BSN5 160 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 OR2J2O76002 312 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 CRPP02741 224 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 METTL15P1P0C7V9 234 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 ARL14EPLP0DKL9 152 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 FAM236CP0DP71 79 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 CDKN2CP42773 168 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 KRTAP10-4P60372 401 aaPredicted RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 CDC42P60953 191 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 HBA1P69905 142 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 CCL7P80098 99 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 AESQ08117 197 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 IAH1Q2TAA2 248 aaPredicted RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 C10orf55Q5SWW7 151 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 C12orf45Q8N5I9 185 aaPredicted RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 TSTD1Q8NFU3 115 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 OR5B17Q8NGF7 314 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 H1FXQ92522 213 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 ADAT1Q9BUB4 502 aaKnown RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 YIPF3Q9GZM5 350 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 TLNRD1Q9H1K6 362 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 PKD1P98161 4303 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 FAT3Q8TDW7 4589 aa0.71□□□□□ -2.3
SCAMP1-204ENST00000511551 MYO5AQ9Y4I1 1855 aaKnown RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 A0A087WUJ7 227 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 OR4C46A6NHA9 309 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SDCBPO00560 298 aaPredicted RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 HCRTO43612 131 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 FADS1O60427 444 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 RPP14O95059 124 aaKnown RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 CNIH1O95406 144 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 HAND1O96004 215 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 IFNA10P01566 189 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 ANGP03950 147 aaKnown RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SMIM10L2AP0DMW4 78 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SMIM10L2BP0DMW5 78 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 NEFHP12036 1026 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 COX6A1P12074 109 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 ERVS71-1P61550 626 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 ITGB3BPQ13352 177 aaPredicted RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 EDDM3AQ14507 147 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SPOPLQ6IQ16 392 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 MIR17HGQ75NE6 70 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 ANKRD29Q8N6D5 301 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 MCFD2Q8NI22 146 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 RMND5BQ96G75 393 aaPredicted RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SCGB3A1Q96QR1 104 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 PAIP2Q9BPZ3 127 aaKnown RBP0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 TMEM147Q9BVK8 224 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 COMMD5Q9GZQ3 224 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 DCSTAMPQ9H295 470 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 MED9Q9NWA0 146 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 SLC22A13Q9Y226 551 aa0.7□□□□□ -2.3
SCAMP1-204ENST00000511551 MUC12Q9UKN1 5478 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 TNCP24821 2201 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 DNAH11Q96DT5 4516 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 CITO14578 2027 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 LRP1BQ9NZR2 4599 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 DOCK4Q8N1I0 1966 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 DNAH6Q9C0G6 4158 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 IGKV1D-42A0A075B6H8 117 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 IGKV3D-7A0A0C4DH55 119 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 IGKV3OR2-268A0A0C4DH90 116 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 hADV38S2A0JD32 116 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 TMEM114B3SHH9 223 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 ZNF682O95780 498 aa0.69□□□□□ -2.3
SCAMP1-204ENST00000511551 PMP2P02689 132 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms