RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SPRY2O43597 315 aa8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 SLC25A5P05141 298 aaKnown RBP8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 S100A9P06702 114 aaKnown RBP8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 RANP62826 216 aaKnown RBP8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 C11orf52Q96A22 123 aa8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 SPAG8Q99932 426 aaPredicted RBP8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 YTHDF2Q9Y5A9 579 aaKnown RBP8.64□□□□□ -1.03
CSNK1E-212ENST00000494610 PGPA6NDG6 321 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 GGTLC3B5MD39 225 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 KRBOX1C9JBD0 128 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 AKR1C3P42330 323 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 ATP5G3P48201 142 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 CNN1P51911 297 aaKnown RBP8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 FAM90A2PQ658T7 463 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 PHLDA1Q8WV24 401 aaPredicted RBP8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 ATG101Q9BSB4 218 aa8.63□□□□□ -1.03
CSNK1E-212ENST00000494610 SLC17A3O00476 420 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 PEX7O00628 323 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 NDUFB4O95168 129 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 CMC4P56277 68 aaPredicted RBP8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 ZNF124Q15973 351 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 CYB561D1Q8N8Q1 229 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 RARRES2Q99969 163 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 MS4A6AQ9H2W1 248 aa8.62□□□□□ -1.03
CSNK1E-212ENST00000494610 H3BTX0 84 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 SOCS3O14543 225 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 SRP19P09132 144 aaKnown RBP8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 SFTA3P0C7M3 94 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 NANOS2P60321 138 aaKnown RBP8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 UBE2G1P62253 170 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 SOHLH1Q5JUK2 328 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 WFDC3Q8IUB2 231 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 DCANP1Q8TF63 244 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 FMC1Q96HJ9 113 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 EPDR1Q9UM22 224 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 HSPG2P98160 4391 aa8.61□□□□□ -1.03
CSNK1E-212ENST00000494610 SCO2A0A1W2PP80 73 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 TMEM218A2RU14 115 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 RBAKDNA6NC62 111 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 K7EQG2 157 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 TCRAP04437 139 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 PSG3Q16557 428 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 LGALS9CQ6DKI2 356 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 TMEM75Q8N9X5 138 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 ZNF738Q8NE65 137 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 RNF183Q96D59 192 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 SMIM12Q96EX1 92 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 SEC11CQ9BY50 192 aa8.6□□□□□ -1.03
CSNK1E-212ENST00000494610 IGKV3-7A0A075B6H7 116 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 F8W036 122 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 DEFB4AO15263 64 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 SNRPCP09234 159 aaKnown RBP8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 S100A1P23297 94 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 CEBPGP53567 150 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 TAS2R60P59551 318 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 Q6ZWC4 215 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 SLC7A5P1Q8MH63 180 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 C2CD4CQ8TF44 421 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 C17orf77Q96MU5 243 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 SMIM7Q9BQ49 75 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 PARLQ9H300 379 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 RPH3ALQ9UNE2 315 aa8.59□□□□□ -1.03
CSNK1E-212ENST00000494610 TRBV6-1A0A0K0K1D8 114 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 ZNF727A8MUV8 499 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 C9JCJ5 164 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 DIRC3C9JPN6 131 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 TMEM183BQ1AE95 376 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 GOLT1AQ6ZVE7 132 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 GBGT1Q8N5D6 347 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 OR10J6PQ8NGY7 276 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 BIN3Q9NQY0 253 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 TP53TG1Q9Y2A0 90 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 LY96Q9Y6Y9 160 aa8.58□□□□□ -1.04
CSNK1E-212ENST00000494610 TRAV8-2A0A0B4J237 113 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 DUSP14O95147 198 aaKnown RBP8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 TFPI2P48307 235 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 GNG4P50150 75 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 APOC4P55056 127 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 TMEM78Q5T7P6 136 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 EBLN2Q6P2I7 272 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 LINC00052Q96N35 136 aa8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 CARHSP1Q9Y2V2 147 aaKnown RBP8.57□□□□□ -1.04
CSNK1E-212ENST00000494610 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
CSNK1E-212ENST00000494610 M0R3E3 92 aa8.56□□□□□ -1.04
CSNK1E-212ENST00000494610 ATP6V1G1O75348 118 aa8.56□□□□□ -1.04
CSNK1E-212ENST00000494610 ZNF688P0C7X2 276 aa8.56□□□□□ -1.04
CSNK1E-212ENST00000494610 RPL35P42766 123 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms