RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 TCEAL7Q9BRU2 100 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 TREM1Q9NP99 234 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 MED9Q9NWA0 146 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 A0A0J9YX75 114 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 SERTM2A0A1B0GWG4 89 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 RAB19A4D1S5 217 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 HLA-DRB4P13762 266 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 CNN1P51911 297 aaKnown RBP9.91□□□□□ -0.82
MSH6-208ENST00000493177 UBE2G1P62253 170 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 VGLL1Q99990 258 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 TM2D3Q9BRN9 247 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 HLA-DRB4X5D2U9 266 aa9.91□□□□□ -0.82
MSH6-208ENST00000493177 TRAV34A0A0B4J273 112 aa9.9□□□□□ -0.82
MSH6-208ENST00000493177 LINC00862A6NCI5 91 aa9.9□□□□□ -0.82
MSH6-208ENST00000493177 SRSF3P84103 164 aaKnown RBP9.9□□□□□ -0.82
MSH6-208ENST00000493177 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
MSH6-208ENST00000493177 TRAV8-1A0A0A6YYK1 113 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 RBAKDNA6NC62 111 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 NPIPB6E9PJ23 425 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 H3BMM0 161 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 SRP19P09132 144 aaKnown RBP9.89□□□□□ -0.83
MSH6-208ENST00000493177 RPL35AP18077 110 aaKnown RBP9.89□□□□□ -0.83
MSH6-208ENST00000493177 ZNF674Q2M3X9 581 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 PRNTQ86SH4 94 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 MUC7Q8TAX7 377 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 C11orf52Q96A22 123 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 CITED4Q96RK1 184 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 AGPAT4-IT1Q9H0P7 198 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 PSG8Q9UQ74 426 aa9.89□□□□□ -0.83
MSH6-208ENST00000493177 ZNF138P52744 262 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 FLI1Q01543 452 aaPredicted RBP9.88□□□□□ -0.83
MSH6-208ENST00000493177 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 TMEM75Q8N9X5 138 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 Q8TAT8 98 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 FMC1Q96HJ9 113 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 LINC00477Q96M19 166 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 SMDT1Q9H4I9 107 aa9.88□□□□□ -0.83
MSH6-208ENST00000493177 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
MSH6-208ENST00000493177 C9JQL5 133 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 TMEM250H0YL14 139 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 S100A9P06702 114 aaKnown RBP9.87□□□□□ -0.83
MSH6-208ENST00000493177 CT45A10P0DMU9 189 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 RPL35P42766 123 aaKnown RBP9.87□□□□□ -0.83
MSH6-208ENST00000493177 FXYD7P58549 80 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 TMEM183BQ1AE95 376 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 TRPT1Q86TN4 253 aaKnown RBP9.87□□□□□ -0.83
MSH6-208ENST00000493177 C2CD4CQ8TF44 421 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 NDFIP1Q9BT67 221 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 DERL1Q9BUN8 251 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 SLC35B3Q9H1N7 401 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 RETNQ9HD89 108 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 ZNF492Q9P255 531 aa9.87□□□□□ -0.83
MSH6-208ENST00000493177 LOC102724200A0A096LPH7 203 aaPredicted RBP9.86□□□□□ -0.83
MSH6-208ENST00000493177 J3KRW8 73 aa9.86□□□□□ -0.83
MSH6-208ENST00000493177 NDUFS6O75380 124 aaKnown RBP9.86□□□□□ -0.83
MSH6-208ENST00000493177 LEPP41159 167 aa9.86□□□□□ -0.83
MSH6-208ENST00000493177 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
MSH6-208ENST00000493177 Q86TA4 180 aa9.86□□□□□ -0.83
MSH6-208ENST00000493177 PARLQ9H300 379 aa9.86□□□□□ -0.83
MSH6-208ENST00000493177 RBMY1BA6NDE4 496 aaKnown RBP9.85□□□□□ -0.83
MSH6-208ENST00000493177 RBMY1EA6NEQ0 496 aaKnown RBP9.85□□□□□ -0.83
MSH6-208ENST00000493177 RBMY1DP0C7P1 496 aaKnown RBP9.85□□□□□ -0.83
MSH6-208ENST00000493177 TAS2R60P59551 318 aa9.85□□□□□ -0.83
MSH6-208ENST00000493177 NUTF2P61970 127 aaKnown RBP9.85□□□□□ -0.83
MSH6-208ENST00000493177 BAGE2Q86Y30 109 aa9.85□□□□□ -0.83
MSH6-208ENST00000493177 KLF12Q9Y4X4 402 aa9.85□□□□□ -0.83
MSH6-208ENST00000493177 AGRNO00468 2067 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 COL7A1Q02388 2944 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 ZNF727A8MUV8 499 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 M0R2Z0 102 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 IGLV2-11P01706 119 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 SFTA3P0C7M3 94 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 TSPOP30536 169 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 GNG4P50150 75 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 SPINK13Q1W4C9 94 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 CENPWQ5EE01 88 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 SOHLH1Q5JUK2 328 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 SAPCD1Q5SSQ6 148 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 ZFAND6Q6FIF0 208 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 ODF3Q96PU9 254 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 SMIM7Q9BQ49 75 aa9.84□□□□□ -0.83
MSH6-208ENST00000493177 TRBV6-1A0A0K0K1D8 114 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 A8MTW9 85 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 GPX1P07203 203 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 CDKN1BP46527 198 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 APOC4P55056 127 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 NDUFA5Q16718 116 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 MORN3Q6PF18 240 aaPredicted RBP9.83□□□□□ -0.84
MSH6-208ENST00000493177 AMTNQ6UX39 209 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 LINC00322Q6ZN03 302 aaPredicted RBP9.83□□□□□ -0.84
MSH6-208ENST00000493177 EIF4E3Q8N5X7 224 aaKnown RBP9.83□□□□□ -0.84
MSH6-208ENST00000493177 NHLRC2Q8NBF2 726 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 C8orf49Q96NF6 230 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 CLUHP3Q96NS8 147 aa9.83□□□□□ -0.84
MSH6-208ENST00000493177 ZFP30Q9Y2G7 519 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms