RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 RNASE8Q8TDE3 154 aaKnown RBP11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 FAM167A-AS1Q96KT0 104 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 PSMG3Q9BT73 122 aaPredicted RBP11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 PAXXQ9BUH6 204 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 IGLV2-18A0A075B6J9 118 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 OR7C2O60412 319 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 MBP02144 154 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 PRM2P04554 102 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 CT45A10P0DMU9 189 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 SERF2P84101 59 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 GCSAMLQ5JQS6 135 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 FAM74A1Q5RGS3 127 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 OR2G3Q8NGZ4 309 aa11.7□□□□□ -0.54
PDLIM2-217ENST00000491330 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 C7orf71A4D174 169 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 RGS13O14921 159 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 NDUFB4O95168 129 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 PYYP10082 97 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 ICAM4Q14773 271 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 MIR17HGQ75NE6 70 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 GNPNAT1Q96EK6 184 aaPredicted RBP11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 SMIM3Q9BZL3 60 aa11.69□□□□□ -0.54
PDLIM2-217ENST00000491330 TRGV2A0A075B6R0 118 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 RNASE4P34096 147 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 FAM122CQ6P4D5 195 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 C9orf47Q6ZRZ4 202 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 RXFP4Q8TDU9 374 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 ARPC5LQ9BPX5 153 aa11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 PLECQ15149 4684 aaKnown RBP11.68□□□□□ -0.54
PDLIM2-217ENST00000491330 GAGE12BA1L429 117 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 PLAC8L1A1L4L8 177 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 M0R3E3 92 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 GAGE7O76087 117 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 GAGE12FP0CL80 117 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 GAGE12GP0CL81 117 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 GAGE12IP0CL82 117 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 C1orf134Q5TEV5 83 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 EXOC3-AS1Q8N2X6 119 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 EIF4E3Q8N5X7 224 aaKnown RBP11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 FXYD5Q96DB9 178 aa11.67□□□□□ -0.54
PDLIM2-217ENST00000491330 BORCS7-ASMTA0A0B4J1R7 106 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 TAAR5O14804 337 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 OR10J4P0C629 311 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 UBE2L3P68036 154 aaKnown RBP11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 ERCC8Q13216 396 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 OR2T35Q8NGX2 323 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 CMTM2Q8TAZ6 248 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 ZNF503Q96F45 646 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 AGPAT4-IT1Q9H0P7 198 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 LENEPQ9Y5L5 61 aa11.66□□□□□ -0.54
PDLIM2-217ENST00000491330 CRISP2P16562 243 aa11.65□□□□□ -0.54
PDLIM2-217ENST00000491330 ZNF138P52744 262 aa11.65□□□□□ -0.54
PDLIM2-217ENST00000491330 LINC00467Q9BRT7 94 aa11.65□□□□□ -0.54
PDLIM2-217ENST00000491330 WFDC1Q9HC57 220 aa11.65□□□□□ -0.54
PDLIM2-217ENST00000491330 TNFSF18Q9UNG2 199 aa11.65□□□□□ -0.54
PDLIM2-217ENST00000491330 KLLNB2CW77 178 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 H3BNG1 76 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 OR10G4Q8NGN3 311 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 OR10G9Q8NGN4 311 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 OR10G7Q8NGN6 311 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 TMED6Q8WW62 240 aa11.64□□□□□ -0.55
PDLIM2-217ENST00000491330 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 SLAQ13239 276 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 FAM19A4Q96LR4 140 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 ZNF492Q9P255 531 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 HYDINQ4G0P3 5121 aa11.63□□□□□ -0.55
PDLIM2-217ENST00000491330 EPPK1P58107 5090 aaKnown RBP11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 FXYD6-FXYD2A0A087WZ82 144 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 TRGV1A0A0A0MS02 117 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 SERTM2A0A1B0GWG4 89 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 CDC34P49427 236 aaPredicted RBP11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 IBA57Q5T440 356 aaKnown RBP11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 Q6ZR54 194 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 Q9H3A6 140 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 GSN-AS1Q9NRJ2 163 aa11.62□□□□□ -0.55
PDLIM2-217ENST00000491330 IGHV1OR15-1A0A075B7D0 117 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 IGKV2-40A0A087WW87 121 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 A0A0J9YY99 117 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 RNF222A6NCQ9 220 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 IGKV2D-40P01614 121 aaPredicted RBP11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 BTN1A1Q13410 526 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 SSX7Q7RTT5 188 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 HSD17B11Q8NBQ5 300 aa11.61□□□□□ -0.55
PDLIM2-217ENST00000491330 PHYHIPLQ96FC7 376 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms