RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 RNASE7Q9H1E1 156 aaKnown RBP7.84□□□□□ -1.15
HDAC3-210ENST00000490808 RPP21Q9H633 154 aaKnown RBP7.84□□□□□ -1.15
HDAC3-210ENST00000490808 PEMTQ9UBM1 199 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 NAT8BQ9UHF3 227 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 SMPXQ9UHP9 88 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 SMIM27A0A1W2PRY6 76 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 OVOL1O14753 267 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 TRBV12-3P01733 135 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 TRGC2P03986 189 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 RPS20P60866 119 aaKnown RBP7.83□□□□□ -1.16
HDAC3-210ENST00000490808 PAFAH1B2P68402 229 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 Q6AWC8 147 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 C8orf86Q6ZUL3 223 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 NHLRC2Q8NBF2 726 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 C4orf3Q8WVX3 66 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 CITED1Q99966 193 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 LENEPQ9Y5L5 61 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 TRAPPC1Q9Y5R8 145 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 CMYA5Q8N3K9 4069 aa7.83□□□□□ -1.16
HDAC3-210ENST00000490808 IGHV3OR16-13A0A075B7E8 117 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 IGHV3-49A0A0A0MS15 119 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 IGHV3-74A0A0B4J1X5 117 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 IGHV3-66A0A0C4DH42 116 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 A8MWP6 167 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 LINC01619G3V211 115 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 M0R3E3 92 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 IGLV2-11P01706 119 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 APOHP02749 345 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-210ENST00000490808 S100A8P05109 93 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 SMUG1Q53HV7 270 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 UNQ9165/PRO28630Q6UXU0 137 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 LCNL1Q6ZST4 164 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 COX8CQ7Z4L0 72 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 ATP5L2Q7Z4Y8 100 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 ZFP82Q8N141 532 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 OR10J6PQ8NGY7 276 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 WIPF2Q8TF74 440 aaPredicted RBP7.82□□□□□ -1.16
HDAC3-210ENST00000490808 BORCS7Q96B45 105 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 SGK494Q96LW2 274 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
HDAC3-210ENST00000490808 C19orf71A6NCJ1 209 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 HLA-DQA1P01909 254 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 KHDC1LQ5JSQ8 128 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 ZNF738Q8NE65 137 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 LINC00477Q96M19 166 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 PRR25Q96S07 402 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 ASCL2Q99929 193 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 GNB1LQ9BYB4 327 aa7.81□□□□□ -1.16
HDAC3-210ENST00000490808 TRAV8-1A0A0A6YYK1 113 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 A0A1B0GW15 77 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 FABP5P3A8MUU1 101 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 NPIPB6E9PJ23 425 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 HOXD3P31249 432 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-210ENST00000490808 ZNF138P52744 262 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 SNRPD3P62318 126 aaKnown RBP7.8□□□□□ -1.16
HDAC3-210ENST00000490808 TM4SF20Q53R12 229 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 ACTL10Q5JWF8 245 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 RBPMS2Q6ZRY4 209 aaKnown RBP7.8□□□□□ -1.16
HDAC3-210ENST00000490808 TCF24Q7RTU0 167 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 OR2D3Q8NGH3 330 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 FRZBQ92765 325 aa7.8□□□□□ -1.16
HDAC3-210ENST00000490808 IGHV4OR15-8A0A075B7B6 117 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 A0A087WW49 117 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-210ENST00000490808 TRBV7-9A0A0J9YWB2 115 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 TMEM189A5PLL7 270 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-210ENST00000490808 TRGC1P0CF51 173 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 NDUFA6P56556 154 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 RAB4BP61018 213 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 KLF5Q13887 457 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-210ENST00000490808 C10orf99Q6UWK7 81 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 C9orf47Q6ZRZ4 202 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 OR1N2Q8NGR9 330 aa7.79□□□□□ -1.16
HDAC3-210ENST00000490808 TSSC4Q9Y5U2 329 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-210ENST00000490808 NOTCH1P46531 2555 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 MEGF8Q7Z7M0 2845 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 C5orf52A6NGY3 159 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 HIGD1CA8MV81 97 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 ZNF705FA8MVS1 300 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-210ENST00000490808 SNURFLB1AK76 121 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 CBLN1P23435 193 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 SYNJ2BPP57105 145 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 SNRPEP62304 92 aaKnown RBP7.78□□□□□ -1.16
HDAC3-210ENST00000490808 HIST1H1AQ02539 215 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-210ENST00000490808 FABP9Q0Z7S8 132 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 RIGQ13278 110 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 KLHL30-AS1Q8NEE0 82 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 OR11H1Q8NG94 326 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
HDAC3-210ENST00000490808 TRAV2A0A0B4J234 112 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 TRAV8-2A0A0B4J237 113 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 UBE2CO00762 179 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BKO60814 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BJP06899 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BOP23527 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BBP33778 126 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms