RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 U3KQE9 123 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 DNAH1Q9P2D7 4330 aa9.92□□□□□ -0.82
HMGN1-211ENST00000471260 IGHV3-66A0A0C4DH42 116 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 HELTA6NFD8 242 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 K7EQG2 157 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 DEFB131AP59861 70 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 TMEM170AQ8WVE7 144 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 MGST2Q99735 147 aa9.91□□□□□ -0.82
HMGN1-211ENST00000471260 C9JCJ5 164 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 TOMM40O96008 361 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 CEMP1Q6PRD7 247 aaPredicted RBP9.9□□□□□ -0.82
HMGN1-211ENST00000471260 C16orf54Q6UWD8 224 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 LINC01551Q86U37 167 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 STHQ8IWL8 128 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 STXBP6Q8NFX7 210 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 NPIPB3Q92617 1050 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 FRZBQ92765 325 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 PFDN5Q99471 154 aa9.9□□□□□ -0.82
HMGN1-211ENST00000471260 SEPSECSQ9HD40 501 aaKnown RBP9.9□□□□□ -0.82
HMGN1-211ENST00000471260 IFITM10A6NMD0 228 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 CA1P00915 261 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-211ENST00000471260 RD3LP0DJH9 198 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-211ENST00000471260 LEMD1Q68G75 181 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 MORN3Q6PF18 240 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-211ENST00000471260 TMEM144Q7Z5S9 345 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 DCANP1Q8TF63 244 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 GLMPQ8WWB7 406 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 C11orf68Q9H3H3 251 aaKnown RBP9.89□□□□□ -0.83
HMGN1-211ENST00000471260 TMEM167BQ9NRX6 74 aa9.89□□□□□ -0.83
HMGN1-211ENST00000471260 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
HMGN1-211ENST00000471260 BUB3O43684 328 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 GATCO43716 136 aaKnown RBP9.88□□□□□ -0.83
HMGN1-211ENST00000471260 IL4P05112 153 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 ARL14EPLP0DKL9 152 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 RPL19P84098 196 aaKnown RBP9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PRR20EP86478 221 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PRR20CP86479 221 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PRR20DP86480 221 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PRR20BP86481 221 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PRR20AP86496 221 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 PYY3Q5JQD4 70 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 OR11H2Q8NH07 326 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 MRPL32Q9BYC8 188 aaKnown RBP9.88□□□□□ -0.83
HMGN1-211ENST00000471260 SLC45A2Q9UMX9 530 aa9.88□□□□□ -0.83
HMGN1-211ENST00000471260 GCHFRP30047 84 aa9.87□□□□□ -0.83
HMGN1-211ENST00000471260 TAS2R45P59539 299 aa9.87□□□□□ -0.83
HMGN1-211ENST00000471260 USF2Q15853 346 aaPredicted RBP9.87□□□□□ -0.83
HMGN1-211ENST00000471260 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
HMGN1-211ENST00000471260 TRPT1Q86TN4 253 aaKnown RBP9.87□□□□□ -0.83
HMGN1-211ENST00000471260 LINC00587B1AMM8 73 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 HMGB3O15347 200 aaKnown RBP9.86□□□□□ -0.83
HMGN1-211ENST00000471260 ZNF688P0C7X2 276 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 PSG1P11464 419 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 SNRPD3P62318 126 aaKnown RBP9.86□□□□□ -0.83
HMGN1-211ENST00000471260 COX19Q49B96 90 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 CST9LP1Q5W188 147 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 MIC13Q5XKP0 118 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 OR10D4PQ8NGN7 298 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 SFRP2Q96HF1 295 aa9.86□□□□□ -0.83
HMGN1-211ENST00000471260 PACRGQ96M98 296 aaPredicted RBP9.86□□□□□ -0.83
HMGN1-211ENST00000471260 A0A1W2PPQ1 181 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 GCGP01275 180 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 ATP5G3P48201 142 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 GAMTQ14353 236 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 SIGLEC15Q6ZMC9 328 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 C11orf45Q8TAV5 145 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 PHLDA1Q8WV24 401 aaPredicted RBP9.85□□□□□ -0.83
HMGN1-211ENST00000471260 RNF125Q96EQ8 232 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 HIST1H2BLQ99880 126 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 NRN1Q9NPD7 142 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 FUT9Q9Y231 359 aa9.85□□□□□ -0.83
HMGN1-211ENST00000471260 PLECQ15149 4684 aaKnown RBP9.84□□□□□ -0.83
HMGN1-211ENST00000471260 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 NDUFB4O95168 129 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 OR5G3P0C626 314 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 OR10J4P0C629 311 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 NUTF2P61970 127 aaKnown RBP9.84□□□□□ -0.83
HMGN1-211ENST00000471260 JOSD1Q15040 202 aaPredicted RBP9.84□□□□□ -0.83
HMGN1-211ENST00000471260 C1orf194Q5T5A4 169 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 TMEM18Q96B42 140 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 TRGV9Q99603 122 aa9.84□□□□□ -0.83
HMGN1-211ENST00000471260 IGKV1D-37A0A075B6S9 117 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 XKRY2A2RUG3 117 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 GIG44P09565 113 aaPredicted RBP9.83□□□□□ -0.84
HMGN1-211ENST00000471260 MIFP14174 115 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 FABP4P15090 132 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 CNN1P51911 297 aaKnown RBP9.83□□□□□ -0.84
HMGN1-211ENST00000471260 PKIAP61925 76 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 PSMG4Q5JS54 123 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 OR10G8Q8NGN5 311 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 AGRNO00468 2067 aa9.83□□□□□ -0.84
HMGN1-211ENST00000471260 A0A1W2PRE2 83 aa9.82□□□□□ -0.84
HMGN1-211ENST00000471260 KNCNA6PVL3 124 aa9.82□□□□□ -0.84
HMGN1-211ENST00000471260 LY6G6CO95867 125 aa9.82□□□□□ -0.84
HMGN1-211ENST00000471260 TCTAP57738 103 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms