RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 CLINT1Q14677 625 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 OXA1LQ15070 435 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 LEMD1Q68G75 181 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 TMEM144Q7Z5S9 345 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 STX12Q86Y82 276 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 OR11H7Q8NGC8 314 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 OR1B1Q8NGR6 318 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 NARS2Q96I59 477 aaKnown RBP3.66□□□□□ -1.82
U2AF1-207ENST00000468039 MGST2Q99735 147 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 RNF126Q9BV68 326 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 SMIM3Q9BZL3 60 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 MED28Q9H204 178 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 SLC25A22Q9H936 323 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 NPVFQ9HCQ7 196 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 NRN1Q9NPD7 142 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 RYR3Q15413 4870 aa3.66□□□□□ -1.82
U2AF1-207ENST00000468039 FAM74A7A6NL05 159 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 KNCNA6PVL3 124 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 HSBP1L1C9JCN9 74 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 K7EQG2 157 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 AGPAT2O15120 278 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 MPC2O95563 127 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 TSHBP01222 138 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 RLN2P04090 185 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 SNRPCP09234 159 aaKnown RBP3.65□□□□□ -1.83
U2AF1-207ENST00000468039 OR5G3P0C626 314 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 CFC1P0CG37 223 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 FGF7P21781 194 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 CYCSP99999 105 aaKnown RBP3.65□□□□□ -1.83
U2AF1-207ENST00000468039 BAXQ07812 192 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 KIAA1644Q3SXP7 199 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 FAM74A3Q4VXF1 159 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 Q5BKY6 102 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 MIC13Q5XKP0 118 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 UQCC3Q6UW78 93 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 LINC00322Q6ZN03 302 aaPredicted RBP3.65□□□□□ -1.83
U2AF1-207ENST00000468039 OR5C1Q8NGR4 320 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 DCANP1Q8TF63 244 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 RCHY1Q96PM5 261 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 OVOL2Q9BRP0 275 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 TMEM147Q9BVK8 224 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 GGTLC1Q9BX51 225 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 SLC25A39Q9BZJ4 359 aaPredicted RBP3.65□□□□□ -1.83
U2AF1-207ENST00000468039 ARL6Q9H0F7 186 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 UQCC1Q9NVA1 299 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 ALMS1Q8TCU4 4167 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 LYSTQ99698 3801 aa3.65□□□□□ -1.83
U2AF1-207ENST00000468039 RYR2Q92736 4967 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 LOC102724200A0A096LPH7 203 aaPredicted RBP3.64□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF98A6NK75 572 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 FNDC10F2Z333 226 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 SMLR1H3BR10 107 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 H3BRN7 92 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 RS1O15537 224 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 COX7A2P2O60397 106 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 HYPMO75409 117 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 EIF3GO75821 320 aaKnown RBP eCLIP3.64□□□□□ -1.83
U2AF1-207ENST00000468039 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 RPL12P30050 165 aaKnown RBP3.64□□□□□ -1.83
U2AF1-207ENST00000468039 S100A11P31949 105 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 PAFAH1B2P68402 229 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 HBG1P69891 147 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 HBG2P69892 147 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 GCSAMLQ5JQS6 135 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 PSMG4Q5JS54 123 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 PATE2Q6UY27 113 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 ZNF546Q86UE3 836 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 OR8I2Q8N0Y5 310 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 SUN5Q8TC36 379 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 C2orf48Q96LS8 159 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 LINC00052Q96N35 136 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 TM2D3Q9BRN9 247 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 SHANK2-AS3Q9BTD1 123 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 GGACTQ9BVM4 153 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 SLC25A31Q9H0C2 315 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 ARV1Q9H2C2 271 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 Q9HAA7 133 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 HIGD1AQ9Y241 93 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 RFNGQ9Y644 331 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 PXMP4Q9Y6I8 212 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 U3KQK5 164 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 CSMD3Q7Z407 3707 aa3.64□□□□□ -1.83
U2AF1-207ENST00000468039 TRAV2A0A0B4J234 112 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 TRAV5A0A0B4J249 113 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 F6UB75 175 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 SOCS3O14543 225 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 CFDP00746 253 aaPredicted RBP3.63□□□□□ -1.83
U2AF1-207ENST00000468039 CA1P00915 261 aaPredicted RBP3.63□□□□□ -1.83
U2AF1-207ENST00000468039 CD5P06127 495 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 GIPP09681 153 aaPredicted RBP3.63□□□□□ -1.83
U2AF1-207ENST00000468039 PET100P0DJ07 73 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 HLA-DMBP28068 263 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 AP2S1P53680 142 aaPredicted RBP3.63□□□□□ -1.83
U2AF1-207ENST00000468039 B2MP61769 119 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 SELENOTP62341 195 aa3.63□□□□□ -1.83
U2AF1-207ENST00000468039 ATP6V1FQ16864 119 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms