RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 H2AFB2P0C5Z0 115 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 LINC00315P59091 139 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 Q6ZRN7 208 aaPredicted RBP14.15□□□□□ -0.14
COL6A1-203ENST00000466285 EXOC3-AS1Q8N2X6 119 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 SLC39A9Q9NUM3 307 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 UQCC1Q9NVA1 299 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 TP53TG3Q9ULZ0 132 aa14.15□□□□□ -0.14
COL6A1-203ENST00000466285 IGKV2-40A0A087WW87 121 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-203ENST00000466285 C7orf71A4D174 169 aa14.14□□□□□ -0.15
COL6A1-203ENST00000466285 KLLNB2CW77 178 aa14.14□□□□□ -0.15
COL6A1-203ENST00000466285 IGKV2D-40P01614 121 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-203ENST00000466285 DAZ2Q13117 558 aaKnown RBP14.14□□□□□ -0.15
COL6A1-203ENST00000466285 TTC32Q5I0X7 151 aa14.14□□□□□ -0.15
COL6A1-203ENST00000466285 PYGO2Q9BRQ0 406 aa14.14□□□□□ -0.15
COL6A1-203ENST00000466285 ZNF324O75467 553 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-203ENST00000466285 BAXQ07812 192 aa14.13□□□□□ -0.15
COL6A1-203ENST00000466285 AGPAT4-IT1Q9H0P7 198 aa14.13□□□□□ -0.15
COL6A1-203ENST00000466285 SCRT2Q9NQ03 307 aa14.13□□□□□ -0.15
COL6A1-203ENST00000466285 RNF24Q9Y225 148 aa14.13□□□□□ -0.15
COL6A1-203ENST00000466285 H3BNG1 76 aa14.12□□□□□ -0.15
COL6A1-203ENST00000466285 S100A10P60903 97 aa14.12□□□□□ -0.15
COL6A1-203ENST00000466285 IL15RAQ13261 267 aa14.12□□□□□ -0.15
COL6A1-203ENST00000466285 TNFRSF18Q9Y5U5 241 aa14.12□□□□□ -0.15
COL6A1-203ENST00000466285 TRGV1A0A0A0MS02 117 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 ZNF253O75346 499 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 IGHV3-53P01767 116 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 FGF7P21781 194 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 RPL29P47914 159 aaKnown RBP14.11□□□□□ -0.15
COL6A1-203ENST00000466285 RAB32Q13637 225 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 GUK1Q16774 197 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 Q6ZRG5 221 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 TMEM252Q8N6L7 170 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 OR1L4Q8NGR5 311 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 BLNKQ8WV28 456 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 VGLL1Q99990 258 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 SLC25A2Q9BXI2 301 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
COL6A1-203ENST00000466285 MRPL16Q9NX20 251 aaKnown RBP14.11□□□□□ -0.15
COL6A1-203ENST00000466285 FUT9Q9Y231 359 aa14.11□□□□□ -0.15
COL6A1-203ENST00000466285 INMT-MINDY4F8WBC2 141 aa14.1□□□□□ -0.15
COL6A1-203ENST00000466285 SLC25A5P05141 298 aaKnown RBP14.1□□□□□ -0.15
COL6A1-203ENST00000466285 RNASE4P34096 147 aaKnown RBP14.1□□□□□ -0.15
COL6A1-203ENST00000466285 ZFAND2AQ8N6M9 145 aa14.1□□□□□ -0.15
COL6A1-203ENST00000466285 MRPL53Q96EL3 112 aaKnown RBP14.1□□□□□ -0.15
COL6A1-203ENST00000466285 PFDN5Q99471 154 aa14.1□□□□□ -0.15
COL6A1-203ENST00000466285 TRGV2A0A075B6R0 118 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 A0A1W2PPQ1 181 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 SPINK4O60575 86 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 BTF3P20290 206 aaKnown RBP14.09□□□□□ -0.15
COL6A1-203ENST00000466285 SULT1A1P50225 295 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 TCL1AP56279 114 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 Q8TAT8 98 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 FAM167A-AS1Q96KT0 104 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 C2orf50Q96LR7 162 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 TMEM14CQ9P0S9 112 aa14.09□□□□□ -0.15
COL6A1-203ENST00000466285 PRAF2O60831 178 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 RAB31Q13636 194 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 RGS21Q2M5E4 152 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 FAM122CQ6P4D5 195 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 MIR17HGQ75NE6 70 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
COL6A1-203ENST00000466285 EIF4E3Q8N5X7 224 aaKnown RBP14.08□□□□□ -0.16
COL6A1-203ENST00000466285 C18orf15Q96N68 181 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 LINC00467Q9BRT7 94 aa14.08□□□□□ -0.16
COL6A1-203ENST00000466285 DNAH10OSP0CZ25 163 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 HIST1H1EP10412 219 aaKnown RBP14.07□□□□□ -0.16
COL6A1-203ENST00000466285 CRISP2P16562 243 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 ICAM4Q14773 271 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 ANXA2RQ3ZCQ2 193 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 ZNF680Q8NEM1 530 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 THAP6Q8TBB0 222 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 NPCDR1Q9BY65 106 aa14.07□□□□□ -0.16
COL6A1-203ENST00000466285 NXPH4O95158 308 aa14.06□□□□□ -0.16
COL6A1-203ENST00000466285 PHYHIPLQ96FC7 376 aa14.06□□□□□ -0.16
COL6A1-203ENST00000466285 GPN1Q9HCN4 374 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-203ENST00000466285 C9orf47Q6ZRZ4 202 aa14.05□□□□□ -0.16
COL6A1-203ENST00000466285 CHAC2Q8WUX2 184 aa14.05□□□□□ -0.16
COL6A1-203ENST00000466285 TIMM9Q9Y5J7 89 aa14.05□□□□□ -0.16
COL6A1-203ENST00000466285 VPS13BQ7Z7G8 4022 aa14.05□□□□□ -0.16
COL6A1-203ENST00000466285 SIVA1O15304 175 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 MPDU1O75352 247 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 S100A11P31949 105 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 NHLH2Q02577 135 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 ST6GAL2Q96JF0 529 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 C8orf49Q96NF6 230 aa14.04□□□□□ -0.16
COL6A1-203ENST00000466285 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL6A1-203ENST00000466285 SIX6O95475 246 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 GPX1P07203 203 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 OR10J4P0C629 311 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 PDE6HQ13956 83 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 STX12Q86Y82 276 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 FXYD5Q96DB9 178 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 LINC00477Q96M19 166 aa14.03□□□□□ -0.16
COL6A1-203ENST00000466285 IGHV1OR15-1A0A075B7D0 117 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 PAX4O43316 350 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 PVALBP20472 110 aaPredicted RBP14.02□□□□□ -0.17
COL6A1-203ENST00000466285 CRYBA4P53673 196 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 FHL2Q14192 279 aa14.02□□□□□ -0.17
COL6A1-203ENST00000466285 MUC21Q5SSG8 566 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms