RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 OR5C1Q8NGR4 320 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 THAP6Q8TBB0 222 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 GATAD1Q8WUU5 269 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 PPP1R1CQ8WVI7 109 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 TMEM147Q9BVK8 224 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 GGACTQ9BVM4 153 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 PARD6GQ9BYG4 376 aaPredicted RBP3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 CTDSP1Q9GZU7 261 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 UQCC1Q9NVA1 299 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 FBXL17Q9UF56 701 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 HECTD4Q9Y4D8 3996 aa3.43□□□□□ -1.86
EXOSC3-204ENST00000465860 A0A087X0K7 114 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 E5RGE8 158 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 M0R2Z0 102 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 ISLRO14498 428 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 CFDP00746 253 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 IGLV2-11P01706 119 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 GIPP09681 153 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 IGLC2P0DOY2 106 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 PYYP10082 97 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 SPP1P10451 314 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 FGF7P21781 194 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 S100A11P31949 105 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 GALR1P47211 349 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 RPL29P47914 159 aaKnown RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 CNN1P51911 297 aaKnown RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 FCN2Q15485 313 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 C10orf113Q5VZT2 155 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 MORN3Q6PF18 240 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF705AQ6ZN79 300 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 FOXI2Q6ZQN5 318 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF546Q86UE3 836 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 STX12Q86Y82 276 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 BAP18Q8IXM2 172 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 SAT2Q96F10 170 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 FAM167A-AS1Q96KT0 104 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 SLC25A2Q9BXI2 301 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 NPCDR1Q9BY65 106 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 SMIM3Q9BZL3 60 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 C11orf68Q9H3H3 251 aaKnown RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 DNAJC4Q9NNZ3 241 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF331Q9NQX6 463 aaPredicted RBP3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 SLC39A9Q9NUM3 307 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 ZNF586Q9NXT0 402 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 MBD2Q9UBB5 411 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 PXMP4Q9Y6I8 212 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 PKD1P98161 4303 aa3.42□□□□□ -1.86
EXOSC3-204ENST00000465860 TRAV12-2A0A075B6T6 113 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 IGHV3OR16-12A0A075B7B8 117 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 G3V3Q6 166 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 M0R3E3 92 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 COX7A2P2O60397 106 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 NDUFB4O95168 129 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 RPL7P18124 248 aaKnown RBP3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 AZU1P20160 251 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 NUP62P37198 522 aaPredicted RBP3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 ID1P41134 155 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 MEOX2P50222 304 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 B2MP61769 119 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 HBG1P69891 147 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 HBG2P69892 147 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 PSG9Q00887 426 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 PSG3Q16557 428 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 SPINK13Q1W4C9 94 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 CEMP1Q6PRD7 247 aaPredicted RBP3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 Q6ZQT7 251 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 MIR17HGQ75NE6 70 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 OR8A1Q8NGG7 326 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 PHLDA1Q8WV24 401 aaPredicted RBP3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 GPR82Q96P67 336 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 WDR61Q9GZS3 305 aaKnown RBP3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 MFFQ9GZY8 342 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 SLC25A31Q9H0C2 315 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 SDF2L1Q9HCN8 221 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 RPRMQ9NS64 109 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 HSPB11Q9Y547 144 aa3.41□□□□□ -1.86
EXOSC3-204ENST00000465860 TRBV19A0A075B6N1 114 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 PLAC8L1A1L4L8 177 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF705GA8MUZ8 300 aaPredicted RBP3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 MIFP14174 115 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 RPL12P30050 165 aaKnown RBP3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 S100A7P31151 101 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 EMP1P54849 157 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 HIST1H1AQ02539 215 aaPredicted RBP3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 ERCC8Q13216 396 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 ATP6V1FQ16864 119 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 EBLN2Q6P2I7 272 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 S100A7AQ86SG5 101 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 BPIFA4PQ86YQ2 179 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 EXOC3-AS1Q8N2X6 119 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 ZNF738Q8NE65 137 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 C11orf45Q8TAV5 145 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 TMEM18Q96B42 140 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 RPUSD4Q96CM3 377 aaKnown RBP3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 ATP5SQ99766 215 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 HRH4Q9H3N8 390 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 KCNIP2Q9NS61 270 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 NACAE9PAV3 2078 aa3.4□□□□□ -1.87
EXOSC3-204ENST00000465860 DNAH11Q96DT5 4516 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms