RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 LINC00477Q96M19 166 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 WFDC10AQ9H1F0 79 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 TREM1Q9NP99 234 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 RPH3ALQ9UNE2 315 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
COL6A1-202ENST00000463060 TRAV34A0A0B4J273 112 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 S100A9P06702 114 aaKnown RBP10.59□□□□□ -0.71
COL6A1-202ENST00000463060 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
COL6A1-202ENST00000463060 TAS2R60P59551 318 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 EBLN2Q6P2I7 272 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 GTSCR1Q86UQ5 136 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 OR10J6PQ8NGY7 276 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 TVP23CQ96ET8 276 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 PRR25Q96S07 402 aa10.59□□□□□ -0.71
COL6A1-202ENST00000463060 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 FBLL1A6NHQ2 334 aaKnown RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 K7EQM0 130 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 RPL35P42766 123 aaKnown RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 ZNF138P52744 262 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 FLI1Q01543 452 aaPredicted RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 HIST1H1AQ02539 215 aaPredicted RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 ACTL10Q5JWF8 245 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
COL6A1-202ENST00000463060 DEFB125Q8N687 156 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 FMC1Q96HJ9 113 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 SGK494Q96LW2 274 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 PARLQ9H300 379 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 ZNF492Q9P255 531 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 PSG8Q9UQ74 426 aa10.58□□□□□ -0.72
COL6A1-202ENST00000463060 NOTCH1P46531 2555 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 TRBV7-9A0A0J9YWB2 115 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
COL6A1-202ENST00000463060 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
COL6A1-202ENST00000463060 LTAP01374 205 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 IGLV2-8P01709 118 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
COL6A1-202ENST00000463060 AKR1C3P42330 323 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 COX8CQ7Z4L0 72 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 ODF3Q96PU9 254 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 MLST8Q9BVC4 326 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 LENEPQ9Y5L5 61 aa10.57□□□□□ -0.72
COL6A1-202ENST00000463060 SFTA3P0C7M3 94 aa10.56□□□□□ -0.72
COL6A1-202ENST00000463060 CRISP2P16562 243 aa10.56□□□□□ -0.72
COL6A1-202ENST00000463060 FAM74A3Q4VXF1 159 aa10.56□□□□□ -0.72
COL6A1-202ENST00000463060 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
COL6A1-202ENST00000463060 Q86TA4 180 aa10.56□□□□□ -0.72
COL6A1-202ENST00000463060 C9JCJ5 164 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 ADCYAP1P18509 176 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 SOHLH1Q5JUK2 328 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 C10orf91Q5T1B1 145 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 LINC00322Q6ZN03 302 aaPredicted RBP10.55□□□□□ -0.72
COL6A1-202ENST00000463060 PRNTQ86SH4 94 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 Q8TAT8 98 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 ASCL2Q99929 193 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 ZFP30Q9Y2G7 519 aa10.55□□□□□ -0.72
COL6A1-202ENST00000463060 A8MZ25 164 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 CEBPGP53567 150 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 UBE2G1P62253 170 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 CENPWQ5EE01 88 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 ZFAND2AQ8N6M9 145 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 OR4B1Q8NGF8 309 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 SMIM7Q9BQ49 75 aa10.54□□□□□ -0.72
COL6A1-202ENST00000463060 ZNF727A8MUV8 499 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 KLLNB2CW77 178 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 IGKV3-20P01619 116 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 GIG44P09565 113 aaPredicted RBP10.53□□□□□ -0.72
COL6A1-202ENST00000463060 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 STHQ8IWL8 128 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 TMEM183AQ8IXX5 376 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 OCC1Q8TAD7 63 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 SMIM12Q96EX1 92 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 SRD5A3Q9H8P0 318 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 LY96Q9Y6Y9 160 aa10.53□□□□□ -0.72
COL6A1-202ENST00000463060 PGPEP1LA6NFU8 196 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 IGHV4-30-4P0DP06 118 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 CRIP1P50238 77 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 C8orf49Q96NF6 230 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 SEC11CQ9BY50 192 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 SDF2L1Q9HCN8 221 aa10.52□□□□□ -0.73
COL6A1-202ENST00000463060 K7EN84 100 aa10.51□□□□□ -0.73
COL6A1-202ENST00000463060 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-202ENST00000463060 GNG4P50150 75 aa10.51□□□□□ -0.73
COL6A1-202ENST00000463060 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-202ENST00000463060 PRR9Q5T870 116 aa10.51□□□□□ -0.73
COL6A1-202ENST00000463060 AURKAIP1Q9NWT8 199 aaPredicted RBP10.51□□□□□ -0.73
COL6A1-202ENST00000463060 CARHSP1Q9Y2V2 147 aaKnown RBP10.51□□□□□ -0.73
COL6A1-202ENST00000463060 F8W036 122 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 K7EIL1 84 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 M0R2Z0 102 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 GCGP01275 180 aa10.5□□□□□ -0.73
COL6A1-202ENST00000463060 LEPP41159 167 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms