RNA–Protein interactions for RNA: ENST00000446646.1

HDAC9-216, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-216ENST00000446646 HLA-DMBP28068 263 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 FUSP35637 526 aaKnown RBP eCLIP5.06□□□□□ -1.6
HDAC9-216ENST00000446646 FGF8P55075 233 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-216ENST00000446646 CMC4P56277 68 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-216ENST00000446646 SELENOTP62341 195 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 TIGITQ495A1 244 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 C1orf134Q5TEV5 83 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 TOMM20LQ6UXN7 152 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 SPATA12Q7Z6I5 190 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 INO80EQ8NBZ0 244 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-216ENST00000446646 OR11H2Q8NH07 326 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 SMIM12Q96EX1 92 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 RARRES2Q99969 163 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 RHPN1-AS1Q9BWJ2 59 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 MED28Q9H204 178 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 LYRM2Q9NU23 88 aaPredicted RBP5.06□□□□□ -1.6
HDAC9-216ENST00000446646 RABAC1Q9UI14 185 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
HDAC9-216ENST00000446646 IGHV3OR16-8A0A075B7F1 116 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 KIR2DL5BA0A0G2JN68 375 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 KIR2DL5BA0A0G2JPC4 375 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 A0A1B0GV90 55 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 M0QXV9 152 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 DNASE2O00115 360 aaPredicted RBP5.05□□□□□ -1.6
HDAC9-216ENST00000446646 ZNF207O43670 478 aaKnown RBP5.05□□□□□ -1.6
HDAC9-216ENST00000446646 IGKV1-17P01599 117 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 METTL15P1P0C7V9 234 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 PMCHP20382 165 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 S100A11P31949 105 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 SULT1A1P50225 295 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 PLP1P60201 277 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 LYZP61626 148 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 RRAS2P62070 204 aaPredicted RBP5.05□□□□□ -1.6
HDAC9-216ENST00000446646 BAXQ07812 192 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 SLC38A11Q08AI6 406 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 MRPL23Q16540 153 aaKnown RBP5.05□□□□□ -1.6
HDAC9-216ENST00000446646 LRRC37A5PQ49AS3 106 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 SAMD13Q5VXD3 122 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 TMEM14EPQ6UXP3 125 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 TMEM144Q7Z5S9 345 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 KIR2DL5AQ8N109 375 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 HSD17B11Q8NBQ5 300 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 KIR2DL5BQ8NHK3 375 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 PTH2Q96A98 100 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 PBDC1Q9BVG4 233 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 CSTL1Q9H114 145 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 NPVFQ9HCQ7 196 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 KCNIP2Q9NS61 270 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 GOLT1BQ9Y3E0 138 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 ALG5Q9Y673 324 aa5.05□□□□□ -1.6
HDAC9-216ENST00000446646 TRGV11A0A075B6L2 103 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 TRAV2A0A0B4J234 112 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 CHEK1O14757 476 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 SIVA1O15304 175 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 TRIAP1O43715 76 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 HSBP1O75506 76 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 PSG1P11464 419 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 CRYBB3P26998 211 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 P2RY1P47900 373 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 XGP55808 180 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 ATP6V1FQ16864 119 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 SSX7Q7RTT5 188 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 APRG1Q8IVJ8 170 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 THAP8Q8NA92 274 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 Q8NAQ8 132 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 ZNF738Q8NE65 137 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 THAP6Q8TBB0 222 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 TMEM170AQ8WVE7 144 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 PPP1R1CQ8WVI7 109 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 GPR82Q96P67 336 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 RNF2Q99496 336 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 RNF126Q9BV68 326 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 TMEM147Q9BVK8 224 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 VSIRQ9H7M9 311 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 UQCC1Q9NVA1 299 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 CELA1Q9UNI1 258 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 NACAE9PAV3 2078 aa5.04□□□□□ -1.6
HDAC9-216ENST00000446646 C11orf94C9JXX5 98 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 PRSS46E5RG02 174 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 MPDU1O75352 247 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 AMBPP02760 352 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 LINC00869P0C866 280 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 P0DMU3 169 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 FAM231AP0DMU4 169 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 FAM231CP0DMU5 169 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 GALR1P47211 349 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 SNRPD3P62318 126 aaKnown RBP5.03□□□□□ -1.6
HDAC9-216ENST00000446646 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 C1orf194Q5T5A4 169 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 Q6ZNX1 250 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 Q6ZRG5 221 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 CYP2G1PQ6ZSU1 146 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 TCF24Q7RTU0 167 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 ZNF503Q96F45 646 aa5.03□□□□□ -1.6
HDAC9-216ENST00000446646 MRPL36Q9P0J6 103 aaKnown RBP5.03□□□□□ -1.6
HDAC9-216ENST00000446646 IGHV3-49A0A0A0MS15 119 aa5.02□□□□□ -1.61
HDAC9-216ENST00000446646 TRAV10A0A0B4J240 114 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms