RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 BTN1A1Q13410 526 aa8.76□□□□□ -1.01
LINC00339-203ENST00000420503 SAT2Q96F10 170 aaPredicted RBP8.76□□□□□ -1.01
LINC00339-203ENST00000420503 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
LINC00339-203ENST00000420503 MGAT4CQ9UBM8 478 aa8.76□□□□□ -1.01
LINC00339-203ENST00000420503 TP53TG3Q9ULZ0 132 aa8.76□□□□□ -1.01
LINC00339-203ENST00000420503 TRGV2A0A075B6R0 118 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 A0A087WTM6 91 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 H0YIZ8 118 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 M0R3E3 92 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 AGPAT2O15120 278 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 SIVA1O15304 175 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 S100A10P60903 97 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 SELENOTP62341 195 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
LINC00339-203ENST00000420503 PRR9Q5T870 116 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 PPP1R1CQ8WVI7 109 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
LINC00339-203ENST00000420503 LYRM2Q9NU23 88 aaPredicted RBP8.75□□□□□ -1.01
LINC00339-203ENST00000420503 MRPL16Q9NX20 251 aaKnown RBP8.75□□□□□ -1.01
LINC00339-203ENST00000420503 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
LINC00339-203ENST00000420503 FAM24AA6NFZ4 105 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 FNDC10F2Z333 226 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 L7N2F9 121 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 CXCL2P19875 107 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 S100A7P31151 101 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 VAMP2P63027 116 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 OR10P1Q8NGE3 313 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 OR5AC2Q9NZP5 309 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
LINC00339-203ENST00000420503 IGSF23A1L1A6 192 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 MPC2O95563 127 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 PVALBP20472 110 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-203ENST00000420503 LEPP41159 167 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 LRRC37A5PQ49AS3 106 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 MIC13Q5XKP0 118 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 WFDC10BQ8IUB3 73 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 TMEM252Q8N6L7 170 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 MED28Q9H204 178 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 NPVFQ9HCQ7 196 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
LINC00339-203ENST00000420503 C7orf71A4D174 169 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 E5RGE8 158 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 ZNF324O75467 553 aaPredicted RBP8.72□□□□□ -1.01
LINC00339-203ENST00000420503 SULT1A1P50225 295 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 CAV2P51636 162 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 ZNF546Q86UE3 836 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 BPIFA4PQ86YQ2 179 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 FRZBQ92765 325 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 GGACTQ9BVM4 153 aa8.72□□□□□ -1.01
LINC00339-203ENST00000420503 PAX4O43316 350 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 SPINK4O60575 86 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 CST7O76096 145 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 NDUFB4O95168 129 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 RNASE4P34096 147 aaKnown RBP8.71□□□□□ -1.02
LINC00339-203ENST00000420503 BCAP31P51572 246 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 ICAM4Q14773 271 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 VWC2Q2TAL6 325 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 PXMP4Q9Y6I8 212 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
LINC00339-203ENST00000420503 IGKV2-40A0A087WW87 121 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-203ENST00000420503 KLLNB2CW77 178 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 IGKV2D-40P01614 121 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-203ENST00000420503 PET100P0DJ07 73 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 TCL1AP56279 114 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 EXOC3-AS1Q8N2X6 119 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
LINC00339-203ENST00000420503 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
LINC00339-203ENST00000420503 GIPP09681 153 aaPredicted RBP8.69□□□□□ -1.02
LINC00339-203ENST00000420503 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 PYYP10082 97 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 S100A11P31949 105 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 CRYBA4P53673 196 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 NHLH2Q02577 135 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 FHL2Q14192 279 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 STX12Q86Y82 276 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
LINC00339-203ENST00000420503 ZFAND2AQ8N6M9 145 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 ASB13Q8WXK3 278 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 ST6GAL2Q96JF0 529 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 VGLL1Q99990 258 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 LINC00467Q9BRT7 94 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 MBD2Q9UBB5 411 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 BOLA1Q9Y3E2 137 aa8.69□□□□□ -1.02
LINC00339-203ENST00000420503 EREGO14944 169 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 CAMLGP49069 296 aa8.68□□□□□ -1.02
LINC00339-203ENST00000420503 HBG1P69891 147 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms