RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MPDU1O75352 247 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 DUSP14O95147 198 aaKnown RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 PTTG1O95997 202 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 SNRPCP09234 159 aaKnown RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 IGLC2P0DOY2 106 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 CXCL2P19875 107 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 RPL29P47914 159 aaKnown RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 CNN1P51911 297 aaKnown RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 PSG9Q00887 426 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 CLINT1Q14677 625 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 LCN15Q6UWW0 184 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 AMTNQ6UX39 209 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 BPIFA4PQ86YQ2 179 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 OR5C1Q8NGR4 320 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 OR1L4Q8NGR5 311 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 THAP6Q8TBB0 222 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 PHLDA1Q8WV24 401 aaPredicted RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 SLC25A31Q9H0C2 315 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 DNAJC4Q9NNZ3 241 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 SLC39A9Q9NUM3 307 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 KLK5Q9Y337 293 aaPredicted RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 ALG5Q9Y673 324 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 EPPK1P58107 5090 aaKnown RBP4.97□□□□□ -1.61
HMGN1-205ENST00000419378 KMT2AQ03164 3969 aa4.97□□□□□ -1.61
HMGN1-205ENST00000419378 IGHV3OR16-12A0A075B7B8 117 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 TRAV5A0A0B4J249 113 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF705FA8MVS1 300 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 H3BTX0 84 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 MPC2O95563 127 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF705DP0CH99 300 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF705BP0CI00 300 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 PET100P0DJ07 73 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 SEC61BP60468 96 aaKnown RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 HIST1H1AQ02539 215 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 PSG3Q16557 428 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 OR11H7Q8NGC8 314 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 OR8A1Q8NGG7 326 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 LRRC20Q8TCA0 184 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 TMED6Q8WW62 240 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 SLC50A1Q9BRV3 221 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 RNF126Q9BV68 326 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF331Q9NQX6 463 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-205ENST00000419378 MBD2Q9UBB5 411 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 GOLT1BQ9Y3E0 138 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 DNAH6Q9C0G6 4158 aa4.96□□□□□ -1.62
HMGN1-205ENST00000419378 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 H3BQ15 152 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 BOLA2-SMG1P6H3BVE0 249 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 M0R2Z0 102 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 CRXO43186 299 aaPredicted RBP4.95□□□□□ -1.62
HMGN1-205ENST00000419378 INSP01308 110 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 AMBPP02760 352 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 PRSS2P07478 247 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 PRB4P10163 310 aaPredicted RBP4.95□□□□□ -1.62
HMGN1-205ENST00000419378 SPINK13Q1W4C9 94 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 GCSAMLQ5JQS6 135 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 C9orf47Q6ZRZ4 202 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 Q6ZTC4 211 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF767PQ75MW2 155 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 BAP18Q8IXM2 172 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 C1orf158Q8N1D5 194 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 RPUSD4Q96CM3 377 aaKnown RBP4.95□□□□□ -1.62
HMGN1-205ENST00000419378 IGF2BP2-AS1Q96M15 143 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 ATP5SQ99766 215 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 WDR61Q9GZS3 305 aaKnown RBP4.95□□□□□ -1.62
HMGN1-205ENST00000419378 KCNIP2Q9NS61 270 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 CELA1Q9UNI1 258 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 HSPB11Q9Y547 144 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 RFNGQ9Y644 331 aa4.95□□□□□ -1.62
HMGN1-205ENST00000419378 TRAV12-2A0A075B6T6 113 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 C11orf94C9JXX5 98 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE7O76087 117 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 HBE1P02100 147 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE12FP0CL80 117 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE12GP0CL81 117 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE12IP0CL82 117 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 RPL12P30050 165 aaKnown RBP4.94□□□□□ -1.62
HMGN1-205ENST00000419378 EMP1P54849 157 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 RHOBP62745 196 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE1Q13065 139 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GAGE4Q13068 117 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 FCN2Q15485 313 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 GUK1Q16774 197 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 TMEM208Q9BTX3 173 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 SLC25A2Q9BXI2 301 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 SMIM3Q9BZL3 60 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF586Q9NXT0 402 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 TMEM14CQ9P0S9 112 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 BIRC6Q9NR09 4857 aa4.94□□□□□ -1.62
HMGN1-205ENST00000419378 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 DNAH10Q8IVF4 4471 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 TRBV19A0A075B6N1 114 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 TRAV10A0A0B4J240 114 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 TMEM189A5PLL7 270 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 PRAC2D3DTV9 90 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 C17orf112F2Z3M2 114 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 ZNF253O75346 499 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 LY6G6CO95867 125 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 PYYP10082 97 aa4.93□□□□□ -1.62
HMGN1-205ENST00000419378 HIST1H1EP10412 219 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms