RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ZNF503Q96F45 646 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 LINC00467Q9BRT7 94 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 SLC25A2Q9BXI2 301 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 PARD6GQ9BYG4 376 aaPredicted RBP6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 PLA2G2EQ9NZK7 142 aa6.41□□□□□ -1.38
SNORD88A-201ENST00000408314 RBAKDNA6NC62 111 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 KLLNB2CW77 178 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 H0YIZ8 118 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 NDUFB4O95168 129 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 NUDT3O95989 172 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 PTTG1O95997 202 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 DAZ2Q13117 558 aaKnown RBP6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 ZNF266Q14584 549 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 ACOT6Q3I5F7 207 aaPredicted RBP6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 GCSAMLQ5JQS6 135 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 FFAR4Q5NUL3 377 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 RXFP4Q8TDU9 374 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 ASB13Q8WXK3 278 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 FAM167A-AS1Q96KT0 104 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 ARPC5LQ9BPX5 153 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 MBD2Q9UBB5 411 aa6.4□□□□□ -1.38
SNORD88A-201ENST00000408314 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GAGE12BA1L429 117 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 H3BNG1 76 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 M0R2N4 97 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 RGS13O14921 159 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GAGE7O76087 117 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 PRM2P04554 102 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GAGE12FP0CL80 117 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GAGE12GP0CL81 117 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GAGE12IP0CL82 117 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 M6PRP20645 277 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 ZNF138P52744 262 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 ANXA2RQ3ZCQ2 193 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 TTC32Q5I0X7 151 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 IBA57Q5T440 356 aaKnown RBP6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 FAM122CQ6P4D5 195 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 PQLC2Q6ZP29 291 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 EXOC3-AS1Q8N2X6 119 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 GNPNAT1Q96EK6 184 aaPredicted RBP6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 C18orf15Q96N68 181 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 AGPAT4-IT1Q9H0P7 198 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 ZNF492Q9P255 531 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 LENEPQ9Y5L5 61 aa6.39□□□□□ -1.39
SNORD88A-201ENST00000408314 IGLV2-18A0A075B6J9 118 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 TRGV2A0A075B6R0 118 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 PRSS29PA6NIE9 313 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 OR10J4P0C629 311 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 RNASE4P34096 147 aaKnown RBP6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 OR5I1Q13606 314 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 FCN2Q15485 313 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 C1orf134Q5TEV5 83 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 Q6ZR54 194 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 ARL6IP6Q8N6S5 226 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 CMTM2Q8TAZ6 248 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 TMED6Q8WW62 240 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 FAM19A4Q96LR4 140 aa6.38□□□□□ -1.39
SNORD88A-201ENST00000408314 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 IGHV1OR15-1A0A075B7D0 117 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 TRAV26-1A0A087WT03 109 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 IGKV2-40A0A087WW87 121 aaPredicted RBP6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 IGKV2D-40P01614 121 aaPredicted RBP6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 PRB4P10163 310 aaPredicted RBP6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 TCL1AP56279 114 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 RANP62826 216 aaKnown RBP6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 ZNF415Q09FC8 603 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 ERCC8Q13216 396 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 SLAQ13239 276 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 BTN1A1Q13410 526 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 KIR3DS1Q14943 382 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 PHYHIPLQ96FC7 376 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 SMIM3Q9BZL3 60 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 MED28Q9H204 178 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 Q9H3A6 140 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 OTORQ9NRC9 128 aa6.37□□□□□ -1.39
SNORD88A-201ENST00000408314 TRGV11A0A075B6L2 103 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 TRGV1A0A0A0MS02 117 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 NBDYA0A0U1RRE5 68 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 SERTM2A0A1B0GWG4 89 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 K7EQM0 130 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 ZNF324O75467 553 aaPredicted RBP6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 MBP02144 154 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 CD300CQ08708 224 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 ZFAND2AQ8N6M9 145 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 VGLL1Q99990 258 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 GSN-AS1Q9NRJ2 163 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 ALG5Q9Y673 324 aa6.36□□□□□ -1.39
SNORD88A-201ENST00000408314 DIRC3C9JPN6 131 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 RTL8CO15255 209 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 SERF2P84101 59 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 FAM159AQ6UWV7 190 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 Q6ZTI0 123 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 SSX7Q7RTT5 188 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 C11orf72Q8NBR9 251 aa6.35□□□□□ -1.39
SNORD88A-201ENST00000408314 INO80EQ8NBZ0 244 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms