RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 RPL32P62910 135 aaKnown RBP11.38□□□□□ -0.59
PCDHA11-201ENST00000398640 TRPT1Q86TN4 253 aaKnown RBP11.38□□□□□ -0.59
PCDHA11-201ENST00000398640 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 GAGE6Q13070 117 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 ZNF114Q8NC26 417 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 TSSC4Q9Y5U2 329 aaPredicted RBP11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 RASL11AQ6T310 242 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 C2orf82Q6UX34 121 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 IGFBPL1Q8WX77 278 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 TP53BP1Q12888 1972 aaPredicted RBP11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 NKAPP1Q8N9T2 125 aa11.37□□□□□ -0.59
PCDHA11-201ENST00000398640 YLPM1P49750 1951 aaKnown RBP11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 IGHV4-61A0A0C4DH41 118 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 UBE2CO00762 179 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 TNFRSF6BO95407 300 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 ANXA2RQ3ZCQ2 193 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 CEP250Q9BV73 2442 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 LY96Q9Y6Y9 160 aa11.36□□□□□ -0.59
PCDHA11-201ENST00000398640 TRAV26-2A0A0B4J265 109 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 PMVKQ15126 192 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 ESDP10768 282 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 C10orf105Q8TEF2 133 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 Q9HAA7 133 aa11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 DIDO1Q9BTC0 2240 aaKnown RBP11.35□□□□□ -0.59
PCDHA11-201ENST00000398640 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 ZNRF2Q8NHG8 242 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 COLCA2A8K830 154 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 SRSF8Q9BRL6 282 aaKnown RBP11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 DOCK9Q9BZ29 2069 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 CCL24O00175 119 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 TPSG1Q9NRR2 321 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 KLF12Q9Y4X4 402 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 IGKV1OR2-108A0A075B7D4 117 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 NXPH4O95158 308 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 PLA2G2AP14555 144 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 C8orf86Q6ZUL3 223 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 IGKV1-6A0A0C4DH72 117 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 GAGE2AQ6NT46 116 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 ALPK3Q96L96 1907 aa11.34□□□□□ -0.59
PCDHA11-201ENST00000398640 TMEM126AQ9H061 195 aa11.33□□□□□ -0.59
PCDHA11-201ENST00000398640 IGHV2-70P01814 119 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 C3orf79P0CE67 100 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 RMI2Q96E14 147 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 NEGR1Q7Z3B1 354 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 VPREB3Q9UKI3 123 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 LRRK1Q38SD2 2015 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 HOXB4P17483 251 aaPredicted RBP11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 FHL1Q13642 323 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 SUMO4Q6EEV6 95 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 SNHG12Q9BXW3 62 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 OBSL1O75147 1896 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 IGKV2D-24A0A075B6R9 120 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 C17orf58Q2M2W7 97 aa11.33□□□□□ -0.6
PCDHA11-201ENST00000398640 SIGMAR1Q99720 223 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 C22orf46C9J442 243 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 ZNF833PQ6ZTB9 187 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 STPG4Q8N801 248 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 TMEM75Q8N9X5 138 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 EDA2RQ9HAV5 297 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 NDUFA4L2Q9NRX3 87 aa11.32□□□□□ -0.6
PCDHA11-201ENST00000398640 WDR86Q86TI4 376 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 A0A1B0GUS0 222 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 LMO1P25800 156 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 PDE6HQ13956 83 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 FBXL19-AS1Q494R0 122 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 I3L3M4 83 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 ANGP03950 147 aaKnown RBP11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 TMEM14BQ9NUH8 114 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 HOXD3P31249 432 aaPredicted RBP11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 LRRC75A-AS1Q8N1F1 130 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 ABCA4P78363 2273 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 ZNF524Q96C55 264 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
PCDHA11-201ENST00000398640 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
PCDHA11-201ENST00000398640 NDUFA4O00483 81 aa11.3□□□□□ -0.6
PCDHA11-201ENST00000398640 LYL1P12980 280 aa11.3□□□□□ -0.6
PCDHA11-201ENST00000398640 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
PCDHA11-201ENST00000398640 DENND4CQ5VZ89 1909 aa11.3□□□□□ -0.6
PCDHA11-201ENST00000398640 CDKN1BP46527 198 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms