RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 NPPCP23582 126 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ODF3L1Q8IXM7 274 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ASCL2Q99929 193 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 BUB1B-PAK6H3BSN5 160 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 P0C879 139 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 C18orf32Q8TCD1 76 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF329Q86UD4 541 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 SIGLEC9Q9Y336 463 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 V9GYV3 84 aa4.33□□□□□ -1.72
CDC42BPA-204ENST00000366767 INAFM2P0DMQ5 153 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 LINC00205P59089 165 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 Q6ZPA2 131 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 K7ERJ3 54 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TCRAP04437 139 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 ATP5G2Q06055 141 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TMEM158Q8WZ71 300 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TNCP24821 2201 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 RNF125Q96EQ8 232 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 VGLL1Q99990 258 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 SLC25A39Q9BZJ4 359 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TRAV40A0A0B4J280 105 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 SMIM27A0A1W2PRY6 76 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 SOCS3O14543 225 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TAL2Q16559 108 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 MYMXA0A1B0GTQ4 84 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TEX48A0A1B0GUV7 120 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 EIF4EBP1Q13541 118 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 PDE6HQ13956 83 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 LYZL1Q6UWQ5 148 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 AMN1Q8IY45 258 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 YPEL4Q96NS1 127 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 GOLGB1Q14789 3259 aaKnown RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 ATG2AQ2TAZ0 1938 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3-66A0A0C4DH42 116 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHV3-23P01764 117 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF625Q96I27 306 aaPredicted RBP4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 PRADC1Q9BSG0 188 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 TMEM14CQ9P0S9 112 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 OR11H6Q8NGC7 330 aa4.32□□□□□ -1.72
CDC42BPA-204ENST00000366767 WNK1Q9H4A3 2382 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 COL5A1P20908 1838 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF134P52741 427 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 SYNJ2BPP57105 145 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF672Q499Z4 452 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 ANKRD39Q53RE8 183 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 PPIFP30405 207 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 C8orf86Q6ZUL3 223 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 WIPF2Q8TF74 440 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 A0A0U1RRA0 63 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGKV1-16P04430 117 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 EP300Q09472 2414 aaPredicted RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 MRPL23Q16540 153 aaKnown RBP4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 DKK4Q9UBT3 224 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 COL4A2P08572 1712 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGHG4P01861 327 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 TMEM75Q8N9X5 138 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 AGRNO00468 2067 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 LINC00158P58513 81 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 A0A1W2PPI3 338 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 LGALS9BQ3B8N2 356 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 LGALS9CQ6DKI2 356 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 LINC01560Q8TB33 94 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 DUX5Q96PT3 197 aa4.31□□□□□ -1.72
CDC42BPA-204ENST00000366767 NPIPB5A8MRT5 1133 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 LEPROTO15243 131 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 LINC00574Q9H8X3 128 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 FGF6P10767 208 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 C12orf74Q32Q52 190 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 MYOD1P15172 320 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 E7EQL1 145 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 SNRPD3P62318 126 aaKnown RBP4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 FAM215AQ9Y5M1 114 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 TIMM23O14925 209 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 ZNF295-AS1Q8N0V1 137 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 TMEM86BQ8N661 226 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 IGKV3-20P01619 116 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 THBDP07204 575 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 NTN5Q8WTR8 489 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 CARD19Q96LW7 228 aa4.3□□□□□ -1.72
CDC42BPA-204ENST00000366767 SH2D1AO60880 128 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 TCTEX1D4Q5JR98 221 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 LYPD2Q6UXB3 125 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 SMKR1H3BMG3 65 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 CGB3P0DN86 165 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 CGB7P0DN87 165 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 KLRD1Q13241 179 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 MLANAQ16655 118 aa4.29□□□□□ -1.72
CDC42BPA-204ENST00000366767 FAM106AQ4KMX7 169 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms