RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TNP2Q05952 138 aa9.98□□□□□ -0.81
RPP40-201ENST00000319533 ATP5SQ99766 215 aa9.98□□□□□ -0.81
RPP40-201ENST00000319533 ZNF471Q9BX82 626 aaPredicted RBP9.98□□□□□ -0.81
RPP40-201ENST00000319533 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 M0R2Z0 102 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 PRM2P04554 102 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 PSG3Q16557 428 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 GUK1Q16774 197 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 SPINK13Q1W4C9 94 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 MORN5Q5VZ52 161 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 ATG101Q9BSB4 218 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 PPP1R14DQ9NXH3 145 aa9.97□□□□□ -0.81
RPP40-201ENST00000319533 TRAV5A0A0B4J249 113 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 SNRPCP09234 159 aaKnown RBP9.96□□□□□ -0.82
RPP40-201ENST00000319533 IGLC2P0DOY2 106 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 HIST1H1AQ02539 215 aaPredicted RBP9.96□□□□□ -0.82
RPP40-201ENST00000319533 SLC51BQ86UW2 128 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 C6orf223Q8N319 242 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 OR8A1Q8NGG7 326 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 STOML3Q8TAV4 291 aa9.96□□□□□ -0.82
RPP40-201ENST00000319533 RPUSD4Q96CM3 377 aaKnown RBP9.96□□□□□ -0.82
RPP40-201ENST00000319533 WDR61Q9GZS3 305 aaKnown RBP9.96□□□□□ -0.82
RPP40-201ENST00000319533 ZNF331Q9NQX6 463 aaPredicted RBP9.96□□□□□ -0.82
RPP40-201ENST00000319533 CBY3A6NI87 242 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 C16orf90A8MZG2 172 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 TAAR5O14804 337 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 IFNA5P01569 189 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 DEFB130BP0DP73 79 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 DEFB130AP0DP74 79 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 AZU1P20160 251 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 RHOBP62745 196 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 SCGB1C1Q8TD33 95 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 SH3BGRL3Q9H299 93 aa9.95□□□□□ -0.82
RPP40-201ENST00000319533 H3BQ15 152 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 H3BTX0 84 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 ATP5G1P05496 136 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 ATP5G3P48201 142 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 TMEM256Q8N2U0 113 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 HSD17B11Q8NBQ5 300 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 TMEM14CQ9P0S9 112 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
RPP40-201ENST00000319533 F5H768 121 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 SLC17A3O00476 420 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 ZNF253O75346 499 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 CCL18P55774 89 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 TAS2R60P59551 318 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 GCSAMLQ5JQS6 135 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
RPP40-201ENST00000319533 MRPL32Q9BYC8 188 aaKnown RBP9.93□□□□□ -0.82
RPP40-201ENST00000319533 PARD6GQ9BYG4 376 aaPredicted RBP9.93□□□□□ -0.82
RPP40-201ENST00000319533 TRAV12-2A0A075B6T6 113 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 BORCS7-ASMTA0A0B4J1R7 106 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 NUDT3O95989 172 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 HIST1H1EP10412 219 aaKnown RBP9.92□□□□□ -0.82
RPP40-201ENST00000319533 TPT1P13693 172 aaKnown RBP9.92□□□□□ -0.82
RPP40-201ENST00000319533 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 ZNF266Q14584 549 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 FAM74A1Q5RGS3 127 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 TEX261Q6UWH6 196 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 ALKAL2Q6UX46 152 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 RNF141Q8WVD5 230 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 SAT2Q96F10 170 aaPredicted RBP9.92□□□□□ -0.82
RPP40-201ENST00000319533 ZNF586Q9NXT0 402 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 TIMM9Q9Y5J7 89 aa9.92□□□□□ -0.82
RPP40-201ENST00000319533 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 PDE6HQ13956 83 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 ZNF493Q6ZR52 646 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 MIR17HGQ75NE6 70 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 ZNF680Q8NEM1 530 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 TMED6Q8WW62 240 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 MRPL53Q96EL3 112 aaKnown RBP9.91□□□□□ -0.82
RPP40-201ENST00000319533 C16orf74Q96GX8 76 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 LINC01587Q99440 93 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 FUT9Q9Y231 359 aa9.91□□□□□ -0.82
RPP40-201ENST00000319533 TIMM8BQ9Y5J9 83 aaPredicted RBP9.91□□□□□ -0.82
RPP40-201ENST00000319533 RGS13O14921 159 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 PYYP10082 97 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 CDKN1BP46527 198 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 FFAR4Q5NUL3 377 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 LINC00612Q8N6U2 182 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 RNASE8Q8TDE3 154 aaKnown RBP9.9□□□□□ -0.82
RPP40-201ENST00000319533 BLNKQ8WV28 456 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 ZNF503Q96F45 646 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 AAMDCQ9H7C9 122 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 PRELID1Q9Y255 219 aa9.9□□□□□ -0.82
RPP40-201ENST00000319533 PRAC2D3DTV9 90 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 PRB4P10163 310 aaPredicted RBP9.89□□□□□ -0.83
RPP40-201ENST00000319533 SSX7Q7RTT5 188 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 Q8N1X5 172 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
RPP40-201ENST00000319533 PAXXQ9BUH6 204 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 OR51M1Q9H341 326 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 Q9H8V8 135 aa9.89□□□□□ -0.83
RPP40-201ENST00000319533 OR7C2O60412 319 aa9.88□□□□□ -0.83
RPP40-201ENST00000319533 TAS2R45P59539 299 aa9.88□□□□□ -0.83
RPP40-201ENST00000319533 EIF5AP63241 154 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms