RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 DIAPH2-AS1Q14236 149 aa10.77□□□□□ -0.68
HPS3-201ENST00000296051 WT1-ASQ06250 92 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 PSG3Q16557 428 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 YPEL4Q96NS1 127 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 CYSLTR1Q9Y271 337 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 OBSL1O75147 1896 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 C15orf65H3BRN8 121 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 DPM2O94777 84 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.69
HPS3-201ENST00000296051 C11orf52Q96A22 123 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 MTORP42345 2549 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 CNTFRP26992 372 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 SYNJ2BPP57105 145 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 KIAA1549LQ6ZVL6 1849 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 TRGV4A0A0C4DH28 118 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 IGKCP01834 107 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
HPS3-201ENST00000296051 PRR20EP86478 221 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 PRR20CP86479 221 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 PRR20DP86480 221 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 PRR20BP86481 221 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 PRR20AP86496 221 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 UBE2DNLQ8IWF7 75 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
HPS3-201ENST00000296051 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 GEMIN7Q9H840 131 aaKnown RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 IGHV1-69DA0A0B4J2H0 117 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 A0A1W2PNU3 283 aaPredicted RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 IGHV1-69P01742 117 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 CHD7Q9P2D1 2997 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 A0A1B0GW15 77 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 ITGB1BP1O14713 200 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 BVES-AS1Q5T3Y7 98 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 OR5A1Q8NGJ0 315 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 DKK1O94907 266 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 DUSP14O95147 198 aaKnown RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 TOMM40O96008 361 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 Q86TA4 180 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 UBE2E2Q96LR5 201 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
HPS3-201ENST00000296051 C2orf16Q68DN1 1984 aa10.75□□□□□ -0.69
HPS3-201ENST00000296051 OVOL3O00110 214 aa10.74□□□□□ -0.69
HPS3-201ENST00000296051 UBE2E1P51965 193 aa10.74□□□□□ -0.69
HPS3-201ENST00000296051 C17orf58Q2M2W7 97 aa10.74□□□□□ -0.69
HPS3-201ENST00000296051 OR9G4Q8NGQ1 327 aa10.74□□□□□ -0.69
HPS3-201ENST00000296051 TTC32Q5I0X7 151 aa10.74□□□□□ -0.69
HPS3-201ENST00000296051 COX6CP09669 75 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 ETDBQ3ZM63 59 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 GAGE13Q4V321 117 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 C1orf122Q6ZSJ8 110 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 PRRC2AP48634 2157 aaKnown RBP10.73□□□□□ -0.69
HPS3-201ENST00000296051 EML5Q05BV3 1969 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 H7C1H1 209 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 SH2D1AO60880 128 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 ESDP10768 282 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 GATA4P43694 442 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 ZNF415Q09FC8 603 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 IGHV3-64A0A075B6Q5 118 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 IGLC7A0M8Q6 106 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 SIGLEC9Q9Y336 463 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 K7EP13 123 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 SPRNQ5BIV9 151 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 Q6ZSR3 168 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 C11orf53Q8IXP5 236 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 RNF138Q8WVD3 245 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 TRGV9Q99603 122 aa10.73□□□□□ -0.69
HPS3-201ENST00000296051 DEFB113Q30KQ7 82 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 C8orf49Q96NF6 230 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 SLC50A1Q9BRV3 221 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 TOMM7Q9P0U1 55 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 ADAMTSL5Q6ZMM2 481 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
HPS3-201ENST00000296051 NDUFA4L2Q9NRX3 87 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 ZNF815PA8K554 130 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 PAX2Q02962 417 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 PPP1R17O96001 155 aa10.72□□□□□ -0.69
HPS3-201ENST00000296051 G3V318 75 aa10.71□□□□□ -0.69
HPS3-201ENST00000296051 SIGLEC15Q6ZMC9 328 aa10.71□□□□□ -0.69
HPS3-201ENST00000296051 KMT2EQ8IZD2 1858 aa10.71□□□□□ -0.69
HPS3-201ENST00000296051 IGHV2-70DA0A0C4DH43 119 aa10.71□□□□□ -0.69
HPS3-201ENST00000296051 C17orf77Q96MU5 243 aa10.71□□□□□ -0.69
HPS3-201ENST00000296051 K7EMI3 77 aa10.71□□□□□ -0.7
HPS3-201ENST00000296051 K7ERJ3 54 aa10.71□□□□□ -0.7
HPS3-201ENST00000296051 Q8TCH9 128 aa10.71□□□□□ -0.7
HPS3-201ENST00000296051 IGLV3-9A0A075B6K5 115 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 IGKV1OR2-108A0A075B7D4 117 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 HOXA3O43365 443 aaPredicted RBP10.7□□□□□ -0.7
HPS3-201ENST00000296051 FCN3O75636 299 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 AMTNQ6UX39 209 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 TMEM101Q96IK0 257 aa10.7□□□□□ -0.7
HPS3-201ENST00000296051 IGFBPL1Q8WX77 278 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms