RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
LINC00339-206ENST00000634451 TMEM14EPQ6UXP3 125 aa8.77□□□□□ -1.01
LINC00339-206ENST00000634451 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
LINC00339-206ENST00000634451 MGST2Q99735 147 aa8.77□□□□□ -1.01
LINC00339-206ENST00000634451 KLF12Q9Y4X4 402 aa8.77□□□□□ -1.01
LINC00339-206ENST00000634451 H3BNG1 76 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 SCGB1D2O95969 90 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 UBE2MP61081 183 aaKnown RBP8.76□□□□□ -1.01
LINC00339-206ENST00000634451 CD300CQ08708 224 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 BTN1A1Q13410 526 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 PYDC2Q56P42 97 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 TOMM5Q8N4H5 51 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 SAT2Q96F10 170 aaPredicted RBP8.76□□□□□ -1.01
LINC00339-206ENST00000634451 C20orf144Q9BQM9 153 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 MRPS26Q9BYN8 205 aaKnown RBP8.76□□□□□ -1.01
LINC00339-206ENST00000634451 TP53TG3Q9ULZ0 132 aa8.76□□□□□ -1.01
LINC00339-206ENST00000634451 RCL1Q9Y2P8 373 aaKnown RBP8.76□□□□□ -1.01
LINC00339-206ENST00000634451 TRGV2A0A075B6R0 118 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 A0A087WTM6 91 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 TRGV1A0A0A0MS02 117 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 C9orf170A2RU37 121 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 H3BMQ9 156 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 K7EPK0 472 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 M0R3E3 92 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 AGPAT2O15120 278 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 SIVA1O15304 175 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 SELENOTP62341 195 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 DAZ2Q13117 558 aaKnown RBP8.75□□□□□ -1.01
LINC00339-206ENST00000634451 PRR9Q5T870 116 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 SMIM8Q96KF7 97 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 SLC50A1Q9BRV3 221 aa8.75□□□□□ -1.01
LINC00339-206ENST00000634451 MRPL16Q9NX20 251 aaKnown RBP8.75□□□□□ -1.01
LINC00339-206ENST00000634451 RABL2AQ9UBK7 228 aaPredicted RBP8.75□□□□□ -1.01
LINC00339-206ENST00000634451 SRRM2Q9UQ35 2752 aaKnown RBP8.75□□□□□ -1.01
LINC00339-206ENST00000634451 CXCL2P19875 107 aa8.74□□□□□ -1.01
LINC00339-206ENST00000634451 S100A7P31151 101 aa8.74□□□□□ -1.01
LINC00339-206ENST00000634451 FAUP35544 74 aaKnown RBP8.74□□□□□ -1.01
LINC00339-206ENST00000634451 RAB2BQ8WUD1 216 aa8.74□□□□□ -1.01
LINC00339-206ENST00000634451 FUT9Q9Y231 359 aa8.74□□□□□ -1.01
LINC00339-206ENST00000634451 GOSR2O14653 212 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 COX7A2P2O60397 106 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 LEPP41159 167 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 MIC13Q5XKP0 118 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 WFDC10BQ8IUB3 73 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 SLC25A21Q9BQT8 299 aaPredicted RBP8.73□□□□□ -1.01
LINC00339-206ENST00000634451 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 NPVFQ9HCQ7 196 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 PGPEP1Q9NXJ5 209 aa8.73□□□□□ -1.01
LINC00339-206ENST00000634451 C7orf71A4D174 169 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 ZNF324O75467 553 aaPredicted RBP8.72□□□□□ -1.01
LINC00339-206ENST00000634451 C10orf113Q5VZT2 155 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 ZNF546Q86UE3 836 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 BPIFA4PQ86YQ2 179 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 FRZBQ92765 325 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
LINC00339-206ENST00000634451 CCSO14618 274 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 PAX4O43316 350 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 SPINK4O60575 86 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 PRAF2O60831 178 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 NDUFB4O95168 129 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 RNASE4P34096 147 aaKnown RBP8.71□□□□□ -1.02
LINC00339-206ENST00000634451 TMBIM6P55061 237 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 ICAM4Q14773 271 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 LYPD5Q6UWN5 251 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 ODF3Q96PU9 254 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 AGPAT4-IT1Q9H0P7 198 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 GSKIPQ9P0R6 139 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 PXMP4Q9Y6I8 212 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 ICOSQ9Y6W8 199 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 DNAH8Q96JB1 4490 aa8.71□□□□□ -1.02
LINC00339-206ENST00000634451 IGKV2-40A0A087WW87 121 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-206ENST00000634451 PIGBOS1A0A0B4J2F0 54 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 C7orf66A4D0T2 115 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 KLLNB2CW77 178 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 IGKV2D-40P01614 121 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-206ENST00000634451 MBPP02686 304 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-206ENST00000634451 TCL1AP56279 114 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 AP3S2P59780 193 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 IAH1Q2TAA2 248 aaPredicted RBP8.7□□□□□ -1.02
LINC00339-206ENST00000634451 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 EXOC3-AS1Q8N2X6 119 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
LINC00339-206ENST00000634451 TSC22D2O75157 780 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 CST7O76096 145 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 NDUFB6O95139 128 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
LINC00339-206ENST00000634451 OR4E1P0C645 316 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 SFTA3P0C7M3 94 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 PYYP10082 97 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 BTCP35070 178 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 CRYBA4P53673 196 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 FHL2Q14192 279 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 BAK1Q16611 211 aa8.69□□□□□ -1.02
LINC00339-206ENST00000634451 GCSAMLQ5JQS6 135 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms