RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 WFDC12Q8WWY7 111 aa13.02□□□□□ -0.32
CNOT3-208ENST00000613073 NPFFR1Q9GZQ6 430 aa13.02□□□□□ -0.32
CNOT3-208ENST00000613073 HES1Q14469 280 aa13.02□□□□□ -0.33
CNOT3-208ENST00000613073 OR11H6Q8NGC7 330 aa13.02□□□□□ -0.33
CNOT3-208ENST00000613073 PAXXQ9BUH6 204 aa13.02□□□□□ -0.33
CNOT3-208ENST00000613073 CACNA1BQ00975 2339 aa13.02□□□□□ -0.33
CNOT3-208ENST00000613073 TCRBV4S1A1TA0A5B7 111 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 CNIH1O95406 144 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 FXYD7P58549 80 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 FAM162BQ5T6X4 162 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 SRSF12Q8WXF0 261 aaKnown RBP13.01□□□□□ -0.33
CNOT3-208ENST00000613073 HSPB8Q9UJY1 196 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 F11RQ9Y624 299 aaKnown RBP13.01□□□□□ -0.33
CNOT3-208ENST00000613073 ZFYVE26Q68DK2 2539 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 SPG11Q96JI7 2443 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 A6NDN8 102 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 TEX22C9J3V5 150 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 H3BRM9 83 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 COX7A2P2O60397 106 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 SLC25A5P05141 298 aaKnown RBP13.01□□□□□ -0.33
CNOT3-208ENST00000613073 PRTN3P24158 256 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 VMO1Q7Z5L0 202 aa13.01□□□□□ -0.33
CNOT3-208ENST00000613073 PSMB11A5LHX3 300 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 ATP5L2Q7Z4Y8 100 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 M0R1W7 72 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 ORM2P19652 201 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 LINC01545Q5VT33 79 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 PATE2Q6UY27 113 aa13□□□□□ -0.33
CNOT3-208ENST00000613073 RPP21Q9H633 154 aaKnown RBP13□□□□□ -0.33
CNOT3-208ENST00000613073 NDUFS8O00217 210 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 APOHP02749 345 aaPredicted RBP12.99□□□□□ -0.33
CNOT3-208ENST00000613073 C10orf113Q5VZT2 155 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 C7orf69Q9H7B7 122 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 MYO18BQ8IUG5 2567 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 P01737 135 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
CNOT3-208ENST00000613073 CFHR4Q92496 578 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
CNOT3-208ENST00000613073 USP9XQ93008 2570 aaPredicted RBP12.99□□□□□ -0.33
CNOT3-208ENST00000613073 CEACAM3P40198 252 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 DYNAPQ8N1N2 210 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 THAP8Q8NA92 274 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 FAM106CPP0CH98 169 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 FGF6P10767 208 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 FAM106AQ4KMX7 169 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 ASCL2Q99929 193 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 A0A1W2PPM0 123 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 ODF3BA8MYP8 253 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 EFNA4P52798 201 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 BPESC1Q9GZL8 116 aa12.98□□□□□ -0.33
CNOT3-208ENST00000613073 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 PGPA6NDG6 321 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 A8MWL6 223 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 NBR2O15453 112 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 LINC00305Q7Z4B0 112 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 AP5S1Q9NUS5 200 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.97□□□□□ -0.33
CNOT3-208ENST00000613073 LOC389332A0A1B0GUA5 103 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 CRYGCP07315 174 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 NMUP48645 174 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 ZNF747Q9BV97 191 aa12.97□□□□□ -0.33
CNOT3-208ENST00000613073 MRPL32Q9BYC8 188 aaKnown RBP12.97□□□□□ -0.33
CNOT3-208ENST00000613073 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.33
CNOT3-208ENST00000613073 DAZAP1Q96EP5 407 aaKnown RBP12.96□□□□□ -0.33
CNOT3-208ENST00000613073 RNF5Q99942 180 aa12.96□□□□□ -0.33
CNOT3-208ENST00000613073 TPPP3Q9BW30 176 aa12.96□□□□□ -0.33
CNOT3-208ENST00000613073 TSSC4Q9Y5U2 329 aaPredicted RBP12.96□□□□□ -0.33
CNOT3-208ENST00000613073 TRAV8-1A0A0A6YYK1 113 aa12.96□□□□□ -0.34
CNOT3-208ENST00000613073 A1L4Q6 167 aa12.96□□□□□ -0.34
CNOT3-208ENST00000613073 K7EMI3 77 aa12.96□□□□□ -0.34
CNOT3-208ENST00000613073 LOXL1Q08397 574 aaPredicted RBP12.96□□□□□ -0.34
CNOT3-208ENST00000613073 PCP2Q8IVA1 136 aa12.96□□□□□ -0.34
CNOT3-208ENST00000613073 NCBP2LA6PVI3 153 aaKnown RBP12.95□□□□□ -0.34
CNOT3-208ENST00000613073 HOXB4P17483 251 aaPredicted RBP12.95□□□□□ -0.34
CNOT3-208ENST00000613073 KLF17Q5JT82 389 aaPredicted RBP12.95□□□□□ -0.34
CNOT3-208ENST00000613073 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 CSMD2Q7Z408 3487 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 FABP2P12104 132 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 PVRIGQ6DKI7 326 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 PRSS3P2Q8NHM4 247 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 EPDR1Q9UM22 224 aa12.95□□□□□ -0.34
CNOT3-208ENST00000613073 A6NJY4 79 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 K7ERJ3 54 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 HSD52Q0P140 79 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 RBPMS2Q6ZRY4 209 aaKnown RBP12.94□□□□□ -0.34
CNOT3-208ENST00000613073 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 WFDC3Q8IUB2 231 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 FXYD5Q96DB9 178 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 GPR82Q96P67 336 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 S4R3C0 116 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 FCGR2BP31994 310 aaPredicted RBP12.94□□□□□ -0.34
CNOT3-208ENST00000613073 CACNG7P62955 275 aa12.94□□□□□ -0.34
CNOT3-208ENST00000613073 CIARTQ8N365 385 aaPredicted RBP12.93□□□□□ -0.34
CNOT3-208ENST00000613073 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 GCSHP23434 173 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 COL8A1P27658 744 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 SAMD5Q5TGI4 173 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 MTURNQ8N3F0 131 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 TRGV9Q99603 122 aa12.93□□□□□ -0.34
CNOT3-208ENST00000613073 NDFIP1Q9BT67 221 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms