RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 TRAV26-2A0A0B4J265 109 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 CKS2P33552 79 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 FAM71F2Q6NXP2 309 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 C16orf92Q96LL3 132 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 LINC00477Q96M19 166 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 PPP1R14DQ9NXH3 145 aa12.12□□□□□ -0.47
FGFR2-222ENST00000604236 ZMAT5Q9UDW3 170 aaKnown RBP12.12□□□□□ -0.47
FGFR2-222ENST00000604236 VAMP3Q15836 100 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 IGF2-ASQ6U949 168 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 WIPF2Q8TF74 440 aaPredicted RBP12.11□□□□□ -0.47
FGFR2-222ENST00000604236 GRAMD2BQ96HH9 432 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 MXRA5Q9NR99 2828 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
FGFR2-222ENST00000604236 H3BUX3 64 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 BTF3P20290 206 aaKnown RBP12.11□□□□□ -0.47
FGFR2-222ENST00000604236 IL17RELQ6ZVW7 336 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 TXNDC17Q9BRA2 123 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 NDUFAF3Q9BU61 184 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 LINC00310P59036 64 aa12.11□□□□□ -0.47
FGFR2-222ENST00000604236 SMAD7O15105 426 aaKnown RBP12.1□□□□□ -0.47
FGFR2-222ENST00000604236 MGPP08493 103 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 DLX6P56179 175 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 DUX3Q96PT4 197 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
FGFR2-222ENST00000604236 C9JCJ5 164 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 D6R8Y8 96 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 TRBV12-3P01733 135 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 PRSS1P07477 247 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 POU2AF1Q16633 256 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 ATRQ13535 2644 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 OR4C46A6NHA9 309 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
FGFR2-222ENST00000604236 TGFAP01135 160 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 IGHV4-38-2P0DP08 117 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 CD99P14209 185 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 C3orf36Q3SXR2 165 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 NCOR1P1Q9H4R4 102 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 F5H697 171 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 IFI27P40305 119 aaPredicted RBP12.09□□□□□ -0.47
FGFR2-222ENST00000604236 SFTA2Q6UW10 78 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 CCL19Q99731 98 aa12.09□□□□□ -0.47
FGFR2-222ENST00000604236 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.47
FGFR2-222ENST00000604236 STPG4Q8N801 248 aa12.08□□□□□ -0.47
FGFR2-222ENST00000604236 A0A1B0GUT8 65 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 HIST1H1AQ02539 215 aaPredicted RBP12.08□□□□□ -0.48
FGFR2-222ENST00000604236 FAM74A4Q5TZK3 123 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 EBLN2Q6P2I7 272 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 Q6ZS46 218 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 GNB1LQ9BYB4 327 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 IGHV4-61A0A0C4DH41 118 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 PIP4P2Q8N4L2 257 aa12.08□□□□□ -0.48
FGFR2-222ENST00000604236 TYMSP04818 313 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 HOXB4P17483 251 aaPredicted RBP12.07□□□□□ -0.48
FGFR2-222ENST00000604236 PRTN3P24158 256 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 TAS2R60P59551 318 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 C10orf99Q6UWK7 81 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 I3L2K1 104 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 IGF1P05019 195 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
FGFR2-222ENST00000604236 RBPMS2Q6ZRY4 209 aaKnown RBP12.07□□□□□ -0.48
FGFR2-222ENST00000604236 Q86TA4 180 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 TRGV9Q99603 122 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 ARL3P36405 182 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 SPANXN1Q5VSR9 72 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 IGF2BP2-AS1Q96M15 143 aa12.07□□□□□ -0.48
FGFR2-222ENST00000604236 A0A087X0K7 114 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 GAS8-AS1O95177 125 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 GP9P14770 177 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 NUDT3O95989 172 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 EMP1P54849 157 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 C19orf24Q9BVV8 132 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 GOSR1O95249 250 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 NEGR1Q7Z3B1 354 aa12.06□□□□□ -0.48
FGFR2-222ENST00000604236 A0A1W2PRX2 142 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 YPEL3P61236 119 aaPredicted RBP12.05□□□□□ -0.48
FGFR2-222ENST00000604236 TMEM30BQ3MIR4 351 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 NDFIP1Q9BT67 221 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 AP5S1Q9NUS5 200 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 TRBV19A0A075B6N1 114 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 FAM181BA6NEQ2 426 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 SH2D1AO60880 128 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 MT-ND6P03923 174 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 CLEC2AQ6UVW9 174 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 FANCD2OSQ96PS1 177 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 C1RLQ9NZP8 487 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 KAAG1Q9UBP8 84 aa12.05□□□□□ -0.48
FGFR2-222ENST00000604236 HAX1O00165 279 aa12.04□□□□□ -0.48
FGFR2-222ENST00000604236 NPSP0C0P6 89 aa12.04□□□□□ -0.48
FGFR2-222ENST00000604236 LINC00614P0C842 121 aa12.04□□□□□ -0.48
FGFR2-222ENST00000604236 EDN2P20800 178 aa12.04□□□□□ -0.48
FGFR2-222ENST00000604236 IGHV3OR16-12A0A075B7B8 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms