RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	CLEC5A	Q9NY25	188 aa		13.17	□□□□□ -0.3
LTBP4-231	ENST00000602251		F6UB75	175 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	SNRPC	P09234	159 aa	Known RBP	13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	GIP	P09681	153 aa	Predicted RBP	13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	CXCL2	P19875	107 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	FAM78B	Q5VT40	261 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	MORN5	Q5VZ52	161 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	CSNK1G2-AS1	Q8NCQ2	148 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	SLC50A1	Q9BRV3	221 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	SCRT2	Q9NQ03	307 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	XCL2	Q9UBD3	114 aa		13.16	□□□□□ -0.3
LTBP4-231	ENST00000602251	TRAV8-2	A0A0B4J237	113 aa		13.15	□□□□□ -0.3
LTBP4-231	ENST00000602251	TRAV5	A0A0B4J249	113 aa		13.15	□□□□□ -0.3
LTBP4-231	ENST00000602251		A0A0J9YX75	114 aa		13.15	□□□□□ -0.3
LTBP4-231	ENST00000602251	DUSP14	O95147	198 aa	Known RBP	13.15	□□□□□ -0.3
LTBP4-231	ENST00000602251	PSG9	Q00887	426 aa		13.15	□□□□□ -0.3
LTBP4-231	ENST00000602251	MRPS12	O15235	138 aa	Known RBP	13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251	FXYD7	P58549	80 aa		13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251	TNP2	Q05952	138 aa		13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251	PSG3	Q16557	428 aa		13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251	GUK1	Q16774	197 aa		13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251	CLUHP3	Q96NS8	147 aa		13.14	□□□□□ -0.31
LTBP4-231	ENST00000602251		H3BTX0	84 aa		13.13	□□□□□ -0.31
LTBP4-231	ENST00000602251	RNF212	Q495C1	297 aa		13.13	□□□□□ -0.31
LTBP4-231	ENST00000602251	GCSAML	Q5JQS6	135 aa		13.13	□□□□□ -0.31
LTBP4-231	ENST00000602251	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.13	□□□□□ -0.31
LTBP4-231	ENST00000602251	PPP1R14D	Q9NXH3	145 aa		13.13	□□□□□ -0.31
LTBP4-231	ENST00000602251	FFAR4	Q5NUL3	377 aa		13.12	□□□□□ -0.31
LTBP4-231	ENST00000602251	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.12	□□□□□ -0.31
LTBP4-231	ENST00000602251		H3BQ15	152 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	ZNF705D	P0CH99	300 aa	Predicted RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	ZNF705B	P0CI00	300 aa	Predicted RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	IGLC2	P0DOY2	106 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	CNN1	P51911	297 aa	Known RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	RHOB	P62745	196 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	HIST1H1A	Q02539	215 aa	Predicted RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	OR2T35	Q8NGX2	323 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	RPUSD4	Q96CM3	377 aa	Known RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	FAM210B	Q96KR6	192 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	MRPL32	Q9BYC8	188 aa	Known RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	SLC35B3	Q9H1N7	401 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	TMEM14C	Q9P0S9	112 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	TIMM9	Q9Y5J7	89 aa		13.11	□□□□□ -0.31
LTBP4-231	ENST00000602251	FXYD6-FXYD2	A0A087WZ82	144 aa		13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	HIST1H1E	P10412	219 aa	Known RBP	13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	ZNF266	Q14584	549 aa		13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	OR8A1	Q8NGG7	326 aa		13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	AQP10	Q96PS8	301 aa		13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	WFDC1	Q9HC57	220 aa		13.1	□□□□□ -0.31
LTBP4-231	ENST00000602251	SRRM2	Q9UQ35	2752 aa	Known RBP	13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	IGHV3OR16-12	A0A075B7B8	117 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	SLC17A3	O00476	420 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251		Q5BKY6	102 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	MIR17HG	Q75NE6	70 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	BLNK	Q8WV28	456 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	ZNF586	Q9NXT0	402 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	FUT9	Q9Y231	359 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	NACA	E9PAV3	2078 aa		13.09	□□□□□ -0.31
LTBP4-231	ENST00000602251	PYY	P10082	97 aa		13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	OR10J6P	Q8NGY7	276 aa		13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	SAT2	Q96F10	170 aa	Predicted RBP	13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	SLC25A2	Q9BXI2	301 aa		13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	OR51M1	Q9H341	326 aa		13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	GOLT1B	Q9Y3E0	138 aa		13.08	□□□□□ -0.32
LTBP4-231	ENST00000602251	TRBV19	A0A075B6N1	114 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	OR7C2	O60412	319 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	ZNF253	O75346	499 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	TMEM208	Q9BTX3	173 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	PAXX	Q9BUH6	204 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251	AAMDC	Q9H7C9	122 aa		13.07	□□□□□ -0.32
LTBP4-231	ENST00000602251		A0A1W2PPV4	95 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	SPART-AS1	P0CW21	52 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	PRB4	P10163	310 aa	Predicted RBP	13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	TAS2R45	P59539	299 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	PDE6H	Q13956	83 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	SPINK13	Q1W4C9	94 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	HSD17B11	Q8NBQ5	300 aa		13.06	□□□□□ -0.32
LTBP4-231	ENST00000602251	SMIM9	A6NGZ8	99 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251		A8MTW9	85 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	BOLA2-SMG1P6	H3BVE0	249 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251		M0R2Z0	102 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	INS	P01308	110 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	OR10J4	P0C629	311 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	NBEAP1	P0C6P0	100 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	KHDC3L	Q587J8	217 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	AMTN	Q6UX39	209 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	FAM167A-AS1	Q96KT0	104 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	IGF2BP2-AS1	Q96M15	143 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	TNFSF18	Q9UNG2	199 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	PRELID1	Q9Y255	219 aa		13.05	□□□□□ -0.32
LTBP4-231	ENST00000602251	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.04	□□□□□ -0.32
LTBP4-231	ENST00000602251	M6PR	P20645	277 aa		13.04	□□□□□ -0.32
LTBP4-231	ENST00000602251	RNF141	Q8WVD5	230 aa		13.04	□□□□□ -0.32
LTBP4-231	ENST00000602251	NEU1	Q99519	415 aa		13.04	□□□□□ -0.32
LTBP4-231	ENST00000602251	HBE1	P02100	147 aa		13.03	□□□□□ -0.32
LTBP4-231	ENST00000602251	MRPL53	Q96EL3	112 aa	Known RBP	13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms