RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 FAM240BA0A1B0GVZ2 78 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 MRPS12O15235 138 aaKnown RBP7.88□□□□□ -1.15
CCDC47-206ENST00000584112 HTN3P15516 51 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 HBG1P69891 147 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 HBG2P69892 147 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 MZT2BQ6NZ67 158 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 BAP18Q8IXM2 172 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 OR1L4Q8NGR5 311 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
CCDC47-206ENST00000584112 PFDN5Q99471 154 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
CCDC47-206ENST00000584112 UQCC1Q9NVA1 299 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 MDFICQ9P1T7 246 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 PXMP4Q9Y6I8 212 aa7.88□□□□□ -1.15
CCDC47-206ENST00000584112 ZNF705GA8MUZ8 300 aaPredicted RBP7.87□□□□□ -1.15
CCDC47-206ENST00000584112 CST7O76096 145 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 S100A11P31949 105 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 CDKN1BP46527 198 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 SULT1A1P50225 295 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 S100A10P60903 97 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 NRARPQ7Z6K4 114 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 STX12Q86Y82 276 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 C15orf53Q8NAA6 179 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 S100ZQ8WXG8 99 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 TMEM37Q8WXS4 190 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 C11orf1Q9H5F2 150 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 DNAJC4Q9NNZ3 241 aa7.87□□□□□ -1.15
CCDC47-206ENST00000584112 LYRM2Q9NU23 88 aaPredicted RBP7.87□□□□□ -1.15
CCDC47-206ENST00000584112 TRAV12-2A0A075B6T6 113 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 FAM24AA6NFZ4 105 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 TAS2R60P59551 318 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 TNP2Q05952 138 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 BAXQ07812 192 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 OPCMLQ14982 345 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 GUK1Q16774 197 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 VWC2Q2TAL6 325 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 RNF212Q495C1 297 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 OR10J6PQ8NGY7 276 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 LINC01587Q99440 93 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 C20orf144Q9BQM9 153 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 WDR83OSQ9Y284 106 aa7.86□□□□□ -1.15
CCDC47-206ENST00000584112 MUC2Q02817 5179 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 UBE2L5PA0A1B0GUS4 154 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 IGLC2P0DOY2 106 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 RPL29P47914 159 aaKnown RBP7.85□□□□□ -1.15
CCDC47-206ENST00000584112 ASAH1Q13510 395 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 RAB32Q13637 225 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 ATP6V1FQ16864 119 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 LGALS9BQ3B8N2 356 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 MIC13Q5XKP0 118 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 TMEM88Q6PEY1 159 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 C16orf74Q96GX8 76 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 GPN1Q9HCN4 374 aaPredicted RBP7.85□□□□□ -1.15
CCDC47-206ENST00000584112 FAT4Q6V0I7 4981 aa7.85□□□□□ -1.15
CCDC47-206ENST00000584112 H7BYZ3 331 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 SLC17A3O00476 420 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 MPDU1O75352 247 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 SNRPCP09234 159 aaKnown RBP7.84□□□□□ -1.15
CCDC47-206ENST00000584112 DEFB130BP0DP73 79 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 DEFB130AP0DP74 79 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 IL15RAQ13261 267 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 MORN5Q5VZ52 161 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 ZNF493Q6ZR52 646 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 TMEM252Q8N6L7 170 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 ENKURQ8TC29 256 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 TMEM263Q8WUH6 116 aaKnown RBP7.84□□□□□ -1.15
CCDC47-206ENST00000584112 CHAC2Q8WUX2 184 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 SLC39A9Q9NUM3 307 aa7.84□□□□□ -1.15
CCDC47-206ENST00000584112 TIMM8BQ9Y5J9 83 aaPredicted RBP7.84□□□□□ -1.15
CCDC47-206ENST00000584112 IGLV2-18A0A075B6J9 118 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 IGSF23A1L1A6 192 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 PLAC8L1A1L4L8 177 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 CBY3A6NI87 242 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 H3BQ15 152 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 H3BTX0 84 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 ZNF253O75346 499 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 RLN2P04090 185 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 PRM2P04554 102 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 ATP5G1P05496 136 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 HTN1P15515 57 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 AZU1P20160 251 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 FGF7P21781 194 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 ATP5G3P48201 142 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 FAM3BP58499 235 aaPredicted RBP7.83□□□□□ -1.16
CCDC47-206ENST00000584112 SAT2Q96F10 170 aaPredicted RBP7.83□□□□□ -1.16
CCDC47-206ENST00000584112 ODF3Q96PU9 254 aa7.83□□□□□ -1.16
CCDC47-206ENST00000584112 F5H768 121 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 LEPP41159 167 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 CCDC28AQ8IWP9 274 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 RNASE8Q8TDE3 154 aaKnown RBP7.82□□□□□ -1.16
CCDC47-206ENST00000584112 MRPL53Q96EL3 112 aaKnown RBP7.82□□□□□ -1.16
CCDC47-206ENST00000584112 ATG101Q9BSB4 218 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 SLC25A31Q9H0C2 315 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 TMEM14CQ9P0S9 112 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 PRELID1Q9Y255 219 aa7.82□□□□□ -1.16
CCDC47-206ENST00000584112 LRP1Q07954 4544 aaKnown RBP7.82□□□□□ -1.16
CCDC47-206ENST00000584112 TRAV5A0A0B4J249 113 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 A6NHS1 94 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 PRAC2D3DTV9 90 aa7.81□□□□□ -1.16
CCDC47-206ENST00000584112 E5RGE8 158 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms