RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 IZUMO1RA6ND01 250 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 M0R3E3 92 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 CSN1S1P47710 185 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 TFPI2P48307 235 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SRSF3P84103 164 aaKnown RBP12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ATG101Q9BSB4 218 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ZNF256Q9Y2P7 627 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 TRRAPQ9Y4A5 3859 aa12.52□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SCO2A0A1W2PP80 73 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 PEX7O00628 323 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 TCRAP04437 139 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 HLA-DMBP28068 263 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 PSG3Q16557 428 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 WFDC3Q8IUB2 231 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 FAM24BQ8N5W8 94 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 RNF182Q8N6D2 247 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 EPDR1Q9UM22 224 aa12.51□□□□□ -0.41
CDK5RAP3-230ENST00000584042 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 IGLL1P15814 213 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 GNG5P63218 68 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ZNF738Q8NE65 137 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 RPUSD4Q96CM3 377 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 TREM1Q9NP99 234 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 CMYA5Q8N3K9 4069 aa12.5□□□□□ -0.41
CDK5RAP3-230ENST00000584042 AKR1C3P42330 323 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 BEAN1Q3B7T3 259 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 PSMG4Q5JS54 123 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 C2CD4CQ8TF44 421 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 FAM110AQ9BQ89 295 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SLC35B3Q9H1N7 401 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 MAP6D1Q9H9H5 199 aa12.49□□□□□ -0.41
CDK5RAP3-230ENST00000584042 RBAKDNA6NC62 111 aa12.48□□□□□ -0.41
CDK5RAP3-230ENST00000584042 C9JQL5 133 aa12.48□□□□□ -0.41
CDK5RAP3-230ENST00000584042 K7EQM0 130 aa12.48□□□□□ -0.41
CDK5RAP3-230ENST00000584042 LINC00052Q96N35 136 aa12.48□□□□□ -0.41
CDK5RAP3-230ENST00000584042 RPH3ALQ9UNE2 315 aa12.48□□□□□ -0.41
CDK5RAP3-230ENST00000584042 FBLL1A6NHQ2 334 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 CMC4P56277 68 aaPredicted RBP12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ODF3L2Q3SX64 289 aa12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 GOLT1AQ6ZVE7 132 aa12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
CDK5RAP3-230ENST00000584042 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SFTA3P0C7M3 94 aa12.46□□□□□ -0.41
CDK5RAP3-230ENST00000584042 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
CDK5RAP3-230ENST00000584042 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
CDK5RAP3-230ENST00000584042 IGKV2-40A0A087WW87 121 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TRBV6-1A0A0K0K1D8 114 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 OR11H12B2RN74 326 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 IGKV2D-40P01614 121 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 S100A9P06702 114 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 DEFB131AP59861 70 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 UBE2G1P62253 170 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 OR8A1Q8NGG7 326 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 FMC1Q96HJ9 113 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 CITED4Q96RK1 184 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 PARLQ9H300 379 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 KLF12Q9Y4X4 402 aa12.45□□□□□ -0.42
CDK5RAP3-230ENST00000584042 NOTCH3Q9UM47 2321 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TMEM218A2RU14 115 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 NPIPB6E9PJ23 425 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 RPL35P42766 123 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 FAM74A3Q4VXF1 159 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 C9orf47Q6ZRZ4 202 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 Q86TA4 180 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 DERL1Q9BUN8 251 aa12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-230ENST00000584042 A0A0J9YX75 114 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 C9JCJ5 164 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 IGLV2-11P01706 119 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 CEBPGP53567 150 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TAS2R60P59551 318 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 FLI1Q01543 452 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 EGFEM1PQ0D2K5 195 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 IGF2BP2-AS1Q96M15 143 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SMIM7Q9BQ49 75 aa12.43□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SORL1Q92673 2214 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TRAV8-1A0A0A6YYK1 113 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 DUSP14O95147 198 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 HIST1H1AQ02539 215 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 TMEM78Q5T7P6 136 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SAMD5Q5TGI4 173 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 EBLN2Q6P2I7 272 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 SEC11CQ9BY50 192 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 C19orf73Q9NVV2 129 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 PPP1R14DQ9NXH3 145 aa12.42□□□□□ -0.42
CDK5RAP3-230ENST00000584042 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms