RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	CD81	P60033	236 aa		11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	UQCC3	Q6UW78	93 aa		11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	COMMD7	Q86VX2	200 aa		11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	EIF4E3	Q8N5X7	224 aa	Known RBP	11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	HIST1H2BA	Q96A08	127 aa		11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	VWF	P04275	2813 aa		11.78	□□□□□ -0.52
CMC2-222	ENST00000570086	NOTCH3	Q9UM47	2321 aa		11.77	□□□□□ -0.52
CMC2-222	ENST00000570086	BEAN1	Q3B7T3	259 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	IGFL4	Q6B9Z1	124 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	RNF182	Q8N6D2	247 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	C20orf173	Q96LM9	149 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	FAM110A	Q9BQ89	295 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	EPDR1	Q9UM22	224 aa		11.77	□□□□□ -0.53
CMC2-222	ENST00000570086	SERTM2	A0A1B0GWG4	89 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	TMEM250	H0YL14	139 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086		M0R3E3	92 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	ZNF688	P0C7X2	276 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	HLA-DMB	P28068	263 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	FAM24B	Q8N5W8	94 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	ZNF738	Q8NE65	137 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	C11orf52	Q96A22	123 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	RPUSD4	Q96CM3	377 aa	Known RBP	11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	LINC00052	Q96N35	136 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	ATG101	Q9BSB4	218 aa		11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	ZMAT5	Q9UDW3	170 aa	Known RBP	11.76	□□□□□ -0.53
CMC2-222	ENST00000570086	DIRC3	C9JPN6	131 aa		11.75	□□□□□ -0.53
CMC2-222	ENST00000570086	PEX7	O00628	323 aa		11.75	□□□□□ -0.53
CMC2-222	ENST00000570086	TCRA	P04437	139 aa		11.75	□□□□□ -0.53
CMC2-222	ENST00000570086	PSMG4	Q5JS54	123 aa		11.75	□□□□□ -0.53
CMC2-222	ENST00000570086	SCO2	A0A1W2PP80	73 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	RBAKDN	A6NC62	111 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086		K7EQM0	130 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	SRP19	P09132	144 aa	Known RBP	11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	GNG5	P63218	68 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	SRSF3	P84103	164 aa	Known RBP	11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	CYB561D1	Q8N8Q1	229 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	MAP6D1	Q9H9H5	199 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	TREM1	Q9NP99	234 aa		11.74	□□□□□ -0.53
CMC2-222	ENST00000570086	FBLL1	A6NHQ2	334 aa	Known RBP	11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	ZNF705F	A8MVS1	300 aa	Predicted RBP	11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	OR11H12	B2RN74	326 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	DEFB131A	P59861	70 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	EGFEM1P	Q0D2K5	195 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	ODF3L2	Q3SX64	289 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	OXLD1	Q5BKU9	147 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	C2CD4C	Q8TF44	421 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	SLC35B3	Q9H1N7	401 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	RPH3AL	Q9UNE2	315 aa		11.73	□□□□□ -0.53
CMC2-222	ENST00000570086	ANK2	Q01484	3957 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	S100A9	P06702	114 aa	Known RBP	11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	AKR1C3	P42330	323 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	CNN1	P51911	297 aa	Known RBP	11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	FOXI2	Q6ZQN5	318 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	GOLT1A	Q6ZVE7	132 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	GTSCR1	Q86UQ5	136 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086	KLF12	Q9Y4X4	402 aa		11.72	□□□□□ -0.53
CMC2-222	ENST00000570086		C9JQL5	133 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	PRAC2	D3DTV9	90 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	SAMD5	Q5TGI4	173 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	EBLN2	Q6P2I7	272 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	TMEM75	Q8N9X5	138 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	OR8A1	Q8NGG7	326 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	OR10J6P	Q8NGY7	276 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	FMC1	Q96HJ9	113 aa		11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	SAV1	Q9H4B6	383 aa	Predicted RBP	11.71	□□□□□ -0.53
CMC2-222	ENST00000570086	TRRAP	Q9Y4A5	3859 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.7	□□□□□ -0.54
CMC2-222	ENST00000570086		A0A0J9YX75	114 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	TRBV6-1	A0A0K0K1D8	114 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	IGKV2D-40	P01614	121 aa	Predicted RBP	11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	CD7	P09564	240 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	TMEM183B	Q1AE95	376 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	C9orf47	Q6ZRZ4	202 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	C19orf73	Q9NVV2	129 aa		11.7	□□□□□ -0.54
CMC2-222	ENST00000570086	NPIPB6	E9PJ23	425 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	DUSP14	O95147	198 aa	Known RBP	11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	TAS2R60	P59551	318 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	UBE2G1	P62253	170 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	FAM74A3	Q4VXF1	159 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	LINC00477	Q96M19	166 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	PARL	Q9H300	379 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	PPP1R14D	Q9NXH3	145 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086	AGRN	O00468	2067 aa		11.69	□□□□□ -0.54
CMC2-222	ENST00000570086		F6UB75	175 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	IGLV2-11	P01706	119 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	SFTA3	P0C7M3	94 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	HLA-DRB4	P13762	266 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	RPL35	P42766	123 aa	Known RBP	11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	FLI1	Q01543	452 aa	Predicted RBP	11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	HIST1H1A	Q02539	215 aa	Predicted RBP	11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	SOHLH1	Q5JUK2	328 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	TMEM78	Q5T7P6	136 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	SLC7A5P1	Q8MH63	180 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	CLUHP3	Q96NS8	147 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	VGLL1	Q99990	258 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	HLA-DRB4	X5D2U9	266 aa		11.68	□□□□□ -0.54
CMC2-222	ENST00000570086	TRAV34	A0A0B4J273	112 aa		11.67	□□□□□ -0.54
CMC2-222	ENST00000570086	TMEM218	A2RU14	115 aa		11.67	□□□□□ -0.54
CMC2-222	ENST00000570086		A8MTW9	85 aa		11.67	□□□□□ -0.54
CMC2-222	ENST00000570086		C9JCJ5	164 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms