RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TMEM37Q8WXS4 190 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 FAM210BQ96KR6 192 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 PFDN5Q99471 154 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 SLC50A1Q9BRV3 221 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 NIPSNAP3BQ9BS92 247 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 TMEM208Q9BTX3 173 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 NDUFAF3Q9BU61 184 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 DNAJC4Q9NNZ3 241 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 LYRM2Q9NU23 88 aaPredicted RBP3.42□□□□□ -1.86
CLK3-219ENST00000567805 UQCC1Q9NVA1 299 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 DKK2Q9UBU2 259 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 WDR83OSQ9Y284 106 aa3.42□□□□□ -1.86
CLK3-219ENST00000567805 UBE2L5PA0A1B0GUS4 154 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 IGSF23A1L1A6 192 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 FAM24AA6NFZ4 105 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 BOLA2-SMG1P6H3BVE0 249 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 ZNF561-AS1K7EIQ3 104 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 CRXO43186 299 aaPredicted RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 MPDU1O75352 247 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 UPK1BO75841 260 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 P0DMU3 169 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 IGLC2P0DOY2 106 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 TSPOP30536 169 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 CDKN1BP46527 198 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 RPL29P47914 159 aaKnown RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 RHOBP62745 196 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 HIST1H1AQ02539 215 aaPredicted RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 BAXQ07812 192 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 OPCMLQ14982 345 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 GUK1Q16774 197 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 ATP6V1FQ16864 119 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 MORN5Q5VZ52 161 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 MIC13Q5XKP0 118 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 BAP18Q8IXM2 172 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 TMEM252Q8N6L7 170 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 RPUSD4Q96CM3 377 aaKnown RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 NMES1Q9C002 83 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 GPN1Q9HCN4 374 aaPredicted RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 ZNF331Q9NQX6 463 aaPredicted RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 PPP1R14DQ9NXH3 145 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 PTTG2Q9NZH5 202 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 YTHDF2Q9Y5A9 579 aaKnown RBP3.41□□□□□ -1.86
CLK3-219ENST00000567805 PXMP4Q9Y6I8 212 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 BIRC6Q9NR09 4857 aa3.41□□□□□ -1.86
CLK3-219ENST00000567805 PKD1P98161 4303 aa3.4□□□□□ -1.86
CLK3-219ENST00000567805 DNAH17Q9UFH2 4485 aa3.4□□□□□ -1.86
CLK3-219ENST00000567805 PKHD1P08F94 4074 aa3.4□□□□□ -1.86
CLK3-219ENST00000567805 TRAV12-2A0A075B6T6 113 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 LYRM9A8MSI8 78 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 ZNF705GA8MUZ8 300 aaPredicted RBP3.4□□□□□ -1.87
CLK3-219ENST00000567805 SLC17A3O00476 420 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 PRAF2O60831 178 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 ZNF253O75346 499 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 RLN2P04090 185 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 FGF7P21781 194 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 TAS2R60P59551 318 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 DAD1P61803 113 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 CYCSP99999 105 aaKnown RBP3.4□□□□□ -1.87
CLK3-219ENST00000567805 POM121L12Q8N7R1 296 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 OR10J6PQ8NGY7 276 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
CLK3-219ENST00000567805 SAT2Q96F10 170 aaPredicted RBP3.4□□□□□ -1.87
CLK3-219ENST00000567805 C16orf74Q96GX8 76 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 ARPC5LQ9BPX5 153 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 C20orf144Q9BQM9 153 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 NPCDR1Q9BY65 106 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 SLC25A31Q9H0C2 315 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 SLC39A9Q9NUM3 307 aa3.4□□□□□ -1.87
CLK3-219ENST00000567805 NACAE9PAV3 2078 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TRBV19A0A075B6N1 114 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TRAV5A0A0B4J249 113 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 PLAC8L1A1L4L8 177 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 PRAC2D3DTV9 90 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 E5RGE8 158 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 INMT-MINDY4F8WBC2 141 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 H3BQ15 152 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 H3BTX0 84 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 H7BYZ3 331 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 PRM2P04554 102 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 SNRPCP09234 159 aaKnown RBP3.39□□□□□ -1.87
CLK3-219ENST00000567805 PET100P0DJ07 73 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 HTN3P15516 51 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 AZU1P20160 251 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 DEFA1P59665 94 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 DEFA3P59666 94 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 IFITM3Q01628 133 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 NHLH2Q02577 135 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 PDE6HQ13956 83 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 RNF212Q495C1 297 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 LRRC37A5PQ49AS3 106 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TMEM88Q6PEY1 159 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 ZNF493Q6ZR52 646 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 OR5C1Q8NGR4 320 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 TMEM263Q8WUH6 116 aaKnown RBP3.39□□□□□ -1.87
CLK3-219ENST00000567805 ODF3Q96PU9 254 aa3.39□□□□□ -1.87
CLK3-219ENST00000567805 LINC01587Q99440 93 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms