RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	C20orf173	Q96LM9	149 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	C17orf77	Q96MU5	243 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	NEU1	Q99519	415 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	SCRT1	Q9BWW7	348 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	ARL6	Q9H0F7	186 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	DOK5	Q9P104	306 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	TNFSF18	Q9UNG2	199 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	RNF24	Q9Y225	148 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	STARD9	Q9P2P6	4700 aa		4.99	□□□□□ -1.61
SF3B3-209	ENST00000567635	IGHV3OR16-12	A0A075B7B8	117 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	TRAV10	A0A0B4J240	114 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	TMEM189	A5PLL7	270 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	IGLL5	B9A064	214 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635		F6UB75	175 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635		H3BRN7	92 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	AGPAT2	O15120	278 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ARPC5	O15511	151 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF705D	P0CH99	300 aa	Predicted RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF705B	P0CI00	300 aa	Predicted RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	PET100	P0DJ07	73 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	RPL7	P18124	248 aa	Known RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	LOR	P23490	312 aa	Predicted RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	RAB31	Q13636	194 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	RAB32	Q13637	225 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF345	Q14585	488 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	LRRC37A5P	Q49AS3	106 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	DNLZ	Q5SXM8	178 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	CFAP161	Q6P656	301 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	PATE2	Q6UY27	113 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF709	Q8N972	641 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	UHRF2	Q96PU4	802 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	SLC35B3	Q9H1N7	401 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	TMPRSS5	Q9H3S3	457 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	GOLT1B	Q9Y3E0	138 aa		4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	LSM5	Q9Y4Y9	91 aa	Known RBP	4.98	□□□□□ -1.61
SF3B3-209	ENST00000567635	NACA	E9PAV3	2078 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	TRAV8-2	A0A0B4J237	113 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	RNF222	A6NCQ9	220 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	FAM24A	A6NFZ4	105 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	C5orf52	A6NGY3	159 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635		A8MTW9	85 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635		E5RGE8	158 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	CST7	O76096	145 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	DUSP14	O95147	198 aa	Known RBP	4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	SPART-AS1	P0CW21	52 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	RAB5C	P51148	216 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	CAV2	P51636	162 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	SLC38A11	Q08AI6	406 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	COTL1	Q14019	142 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	PEA15	Q15121	130 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	C12orf74	Q32Q52	190 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	IGFL4	Q6B9Z1	124 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	ALKAL2	Q6UX46	152 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635		Q6ZTC4	211 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	RNF182	Q8N6D2	247 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	ZNF738	Q8NE65	137 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	AQP10	Q96PS8	301 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	ARV1	Q9H2C2	271 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	C11orf1	Q9H5F2	150 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	DNAJC4	Q9NNZ3	241 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	OR5AC2	Q9NZP5	309 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	APLN	Q9ULZ1	77 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	CELA1	Q9UNI1	258 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	RFNG	Q9Y644	331 aa		4.97	□□□□□ -1.61
SF3B3-209	ENST00000567635	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635		A0A087X0K7	114 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	DEFB131B	A0A096LNP1	70 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635		A0A1B0GV90	55 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	TMEM218	A2RU14	115 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	COX7A2P2	O60397	106 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	HBE1	P02100	147 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	AMBP	P02760	352 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	CAMLG	P49069	296 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	SULT1A1	P50225	295 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	CNN1	P51911	297 aa	Known RBP	4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	EMP1	P54849	157 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	S100A10	P60903	97 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	SNRPE	P62304	92 aa	Known RBP	4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	HBG1	P69891	147 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	HBG2	P69892	147 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	PSG3	Q16557	428 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	C10orf113	Q5VZT2	155 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	AMTN	Q6UX39	209 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635		Q6ZRG5	221 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	LINC00305	Q7Z4B0	112 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	C1orf158	Q8N1D5	194 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	C15orf54	Q8N8G6	183 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	PHYHIPL	Q96FC7	376 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	IGF2BP2-AS1	Q96M15	143 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	MGST2	Q99735	147 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	C2orf88	Q9BSF0	95 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	LYRM2	Q9NU23	88 aa	Predicted RBP	4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	UQCC1	Q9NVA1	299 aa		4.96	□□□□□ -1.62
SF3B3-209	ENST00000567635	IGHV4-4	A0A075B6R2	117 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	TEX48	A0A1B0GUV7	120 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	KANTR	A0A1W2PQU2	76 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635	IGSF23	A1L1A6	192 aa		4.95	□□□□□ -1.62
SF3B3-209	ENST00000567635		M0R2Z0	102 aa		4.95	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms