RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RHOBP62745 196 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 BAXQ07812 192 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 RAB31Q13636 194 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 TMEM88Q6PEY1 159 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 CHAC2Q8WUX2 184 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 SLC25A31Q9H0C2 315 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 DNAJC4Q9NNZ3 241 aa10.06□□□□□ -0.8
COMMD4-216ENST00000567023 A0A1B0GVY2 172 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 RTL8CO15255 209 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 COX7A2P2O60397 106 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 PET100P0DJ07 73 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 CAMLGP49069 296 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 NHLH2Q02577 135 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 FCN2Q15485 313 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 MORN5Q5VZ52 161 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 C10orf113Q5VZT2 155 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 Q6ZR54 194 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 Q6ZRG5 221 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 C15orf53Q8NAA6 179 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 SAT2Q96F10 170 aaPredicted RBP10.05□□□□□ -0.8
COMMD4-216ENST00000567023 LINC01587Q99440 93 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 C20orf144Q9BQM9 153 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 PPP1R14DQ9NXH3 145 aa10.05□□□□□ -0.8
COMMD4-216ENST00000567023 UBE2L5PA0A1B0GUS4 154 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 M0R2N4 97 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 RPL29P47914 159 aaKnown RBP10.04□□□□□ -0.8
COMMD4-216ENST00000567023 OPCMLQ14982 345 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 UBE2DNLQ8IWF7 75 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 OR5C1Q8NGR4 320 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 MED28Q9H204 178 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 PXMP4Q9Y6I8 212 aa10.04□□□□□ -0.8
COMMD4-216ENST00000567023 H3BQ15 152 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 MPDU1O75352 247 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 FAM3BP58499 235 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-216ENST00000567023 GUK1Q16774 197 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 OR1L4Q8NGR5 311 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 RNASE8Q8TDE3 154 aaKnown RBP10.03□□□□□ -0.8
COMMD4-216ENST00000567023 ASB13Q8WXK3 278 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 C16orf74Q96GX8 76 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 MBD2Q9UBB5 411 aa10.03□□□□□ -0.8
COMMD4-216ENST00000567023 TIMM8BQ9Y5J9 83 aaPredicted RBP10.03□□□□□ -0.8
COMMD4-216ENST00000567023 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.8
COMMD4-216ENST00000567023 CBY3A6NI87 242 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 PRSS29PA6NIE9 313 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 H7BYZ3 331 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 SLC17A3O00476 420 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 SNRPCP09234 159 aaKnown RBP10.02□□□□□ -0.81
COMMD4-216ENST00000567023 DEFB130BP0DP73 79 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 DEFB130AP0DP74 79 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 TMEM263Q8WUH6 116 aaKnown RBP10.02□□□□□ -0.81
COMMD4-216ENST00000567023 PFDN5Q99471 154 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 HSPB11Q9Y547 144 aa10.02□□□□□ -0.81
COMMD4-216ENST00000567023 IGLV2-18A0A075B6J9 118 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 PRAC2D3DTV9 90 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 ZNF253O75346 499 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 ATP5G1P05496 136 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 GIPP09681 153 aaPredicted RBP10.01□□□□□ -0.81
COMMD4-216ENST00000567023 FGF7P21781 194 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 RPL12P30050 165 aaKnown RBP10.01□□□□□ -0.81
COMMD4-216ENST00000567023 ATP5G3P48201 142 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 ODF3Q96PU9 254 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 NPCDR1Q9BY65 106 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 SLC39A9Q9NUM3 307 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 NACAE9PAV3 2078 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 DNAH11Q96DT5 4516 aa10.01□□□□□ -0.81
COMMD4-216ENST00000567023 TRAV5A0A0B4J249 113 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 PRB4P10163 310 aaPredicted RBP10□□□□□ -0.81
COMMD4-216ENST00000567023 HTN1P15515 57 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 CLINT1Q14677 625 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 KIR3DS1Q14943 382 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 THAP6Q8TBB0 222 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
COMMD4-216ENST00000567023 ZNF586Q9NXT0 402 aa10□□□□□ -0.81
COMMD4-216ENST00000567023 PCLOQ9Y6V0 5065 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 F5H768 121 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 H3BTX0 84 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 GFI1BQ5VTD9 330 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 LINC00612Q8N6U2 182 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 MRPL53Q96EL3 112 aaKnown RBP9.99□□□□□ -0.81
COMMD4-216ENST00000567023 ATP5SQ99766 215 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 KRTAP17-1Q9BYP8 105 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
COMMD4-216ENST00000567023 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
COMMD4-216ENST00000567023 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
COMMD4-216ENST00000567023 CT45A10P0DMU9 189 aa9.98□□□□□ -0.81
COMMD4-216ENST00000567023 SOHLH1Q5JUK2 328 aa9.98□□□□□ -0.81
COMMD4-216ENST00000567023 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
COMMD4-216ENST00000567023 PDE6HQ13956 83 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 Q5BKY6 102 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 CCDC28AQ8IWP9 274 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 ATG101Q9BSB4 218 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 PARD6GQ9BYG4 376 aaPredicted RBP9.97□□□□□ -0.81
COMMD4-216ENST00000567023 KCNIP2Q9NS61 270 aa9.97□□□□□ -0.81
COMMD4-216ENST00000567023 NDUFB4O95168 129 aa9.96□□□□□ -0.82
COMMD4-216ENST00000567023 MED14OSP0DP75 135 aa9.96□□□□□ -0.82
COMMD4-216ENST00000567023 HIST1H1EP10412 219 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms