RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 FAM210AQ96ND0 272 aa12.69□□□□□ -0.38
CMTM3-208ENST00000564247 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
CMTM3-208ENST00000564247 SORL1Q92673 2214 aa12.69□□□□□ -0.38
CMTM3-208ENST00000564247 LOC102723971A0A1B0GUV8 181 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 C11orf94C9JXX5 98 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 SOCS3O14543 225 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
CMTM3-208ENST00000564247 PEA15Q15121 130 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 MED9Q9NWA0 146 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 DNAH9Q9NYC9 4486 aa12.68□□□□□ -0.38
CMTM3-208ENST00000564247 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 RAB19A4D1S5 217 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 F6UZH7 168 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 MEF2BQ02080 365 aaPredicted RBP12.67□□□□□ -0.38
CMTM3-208ENST00000564247 TOR2AQ5JU69 321 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 ZNF506Q5JVG8 444 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 IGFL4Q6B9Z1 124 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 TCEAL7Q9BRU2 100 aa12.67□□□□□ -0.38
CMTM3-208ENST00000564247 LINC00862A6NCI5 91 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 ATP5G3P48201 142 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 RNF182Q8N6D2 247 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 ARL6IP6Q8N6S5 226 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 C5orf17Q8NAS9 161 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 MRPL53Q96EL3 112 aaKnown RBP12.66□□□□□ -0.38
CMTM3-208ENST00000564247 RARRES2Q99969 163 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
CMTM3-208ENST00000564247 ZNF256Q9Y2P7 627 aaPredicted RBP12.66□□□□□ -0.38
CMTM3-208ENST00000564247 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 PDE6DO43924 150 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 DEFB121Q5J5C9 76 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 PSMG4Q5JS54 123 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 EPDR1Q9UM22 224 aa12.65□□□□□ -0.38
CMTM3-208ENST00000564247 COL7A1Q02388 2944 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 K7EQM0 130 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 CCDC28AQ8IWP9 274 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 FAM24BQ8N5W8 94 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 HIST1H2BAQ96A08 127 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 RPUSD4Q96CM3 377 aaKnown RBP12.64□□□□□ -0.39
CMTM3-208ENST00000564247 RPH3ALQ9UNE2 315 aa12.64□□□□□ -0.39
CMTM3-208ENST00000564247 ZNF705FA8MVS1 300 aaPredicted RBP12.63□□□□□ -0.39
CMTM3-208ENST00000564247 M0R3E3 92 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 DEFB131AP59861 70 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 COMMD7Q86VX2 200 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 TREM1Q9NP99 234 aa12.63□□□□□ -0.39
CMTM3-208ENST00000564247 SERTM2A0A1B0GWG4 89 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 DIRC3C9JPN6 131 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 NDUFS6O75380 124 aaKnown RBP12.62□□□□□ -0.39
CMTM3-208ENST00000564247 CD81P60033 236 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 NDUFA5Q16718 116 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 EBLN2Q6P2I7 272 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 ATG101Q9BSB4 218 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 MAP6D1Q9H9H5 199 aa12.62□□□□□ -0.39
CMTM3-208ENST00000564247 PEX7O00628 323 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 TCRAP04437 139 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 GNG5P63218 68 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 UQCC3Q6UW78 93 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 OR10J6PQ8NGY7 276 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 PRR25Q96S07 402 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 FAM110AQ9BQ89 295 aa12.61□□□□□ -0.39
CMTM3-208ENST00000564247 TMEM250H0YL14 139 aa12.6□□□□□ -0.39
CMTM3-208ENST00000564247 S100A9P06702 114 aaKnown RBP12.6□□□□□ -0.39
CMTM3-208ENST00000564247 CNN1P51911 297 aaKnown RBP12.6□□□□□ -0.39
CMTM3-208ENST00000564247 FOXI2Q6ZQN5 318 aa12.6□□□□□ -0.39
CMTM3-208ENST00000564247 GOLT1AQ6ZVE7 132 aa12.6□□□□□ -0.39
CMTM3-208ENST00000564247 CYB561D1Q8N8Q1 229 aa12.6□□□□□ -0.39
CMTM3-208ENST00000564247 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 RBAKDNA6NC62 111 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 FBLL1A6NHQ2 334 aaKnown RBP12.59□□□□□ -0.39
CMTM3-208ENST00000564247 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 SRP19P09132 144 aaKnown RBP12.59□□□□□ -0.39
CMTM3-208ENST00000564247 CD7P09564 240 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 AKR1C3P42330 323 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 CEBPGP53567 150 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 SRSF3P84103 164 aaKnown RBP12.59□□□□□ -0.39
CMTM3-208ENST00000564247 ODF3L2Q3SX64 289 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 EIF4E3Q8N5X7 224 aaKnown RBP12.59□□□□□ -0.39
CMTM3-208ENST00000564247 OR8A1Q8NGG7 326 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 B9D2Q9BPU9 175 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 SLC35B3Q9H1N7 401 aa12.59□□□□□ -0.39
CMTM3-208ENST00000564247 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
CMTM3-208ENST00000564247 UBE2G1P62253 170 aa12.58□□□□□ -0.4
CMTM3-208ENST00000564247 C11orf52Q96A22 123 aa12.58□□□□□ -0.4
CMTM3-208ENST00000564247 LINC00477Q96M19 166 aa12.58□□□□□ -0.4
CMTM3-208ENST00000564247 SAV1Q9H4B6 383 aaPredicted RBP12.58□□□□□ -0.4
CMTM3-208ENST00000564247 IGKV2-40A0A087WW87 121 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-208ENST00000564247 IGKV2D-40P01614 121 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-208ENST00000564247 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
CMTM3-208ENST00000564247 ACTL10Q5JWF8 245 aa12.57□□□□□ -0.4
CMTM3-208ENST00000564247 TMEM78Q5T7P6 136 aa12.57□□□□□ -0.4
CMTM3-208ENST00000564247 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
CMTM3-208ENST00000564247 PPP1R14DQ9NXH3 145 aa12.57□□□□□ -0.4
CMTM3-208ENST00000564247 A0A0J9YX75 114 aa12.56□□□□□ -0.4
CMTM3-208ENST00000564247 F6UB75 175 aa12.56□□□□□ -0.4
CMTM3-208ENST00000564247 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms