RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CCDC28AQ8IWP9 274 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 SFT2D1Q8WV19 159 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 SH3BGRL3Q9H299 93 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 Q9H3A6 140 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 ZNF586Q9NXT0 402 aa7.93□□□□□ -1.14
TPM1-229ENST00000561242 SERTM2A0A1B0GWG4 89 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 MAP1LC3B2A6NCE7 125 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 H3BQ15 152 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 INSP01308 110 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 ARL14EPLP0DKL9 152 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 GCHFRP30047 84 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 CNN1P51911 297 aaKnown RBP7.92□□□□□ -1.14
TPM1-229ENST00000561242 CST9LP1Q5W188 147 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 TRPT1Q86TN4 253 aaKnown RBP7.92□□□□□ -1.14
TPM1-229ENST00000561242 OR11H4Q8NGC9 324 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 OR11H2Q8NH07 326 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 C17orf77Q96MU5 243 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 MAP1LC3BQ9GZQ8 125 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 OTORQ9NRC9 128 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 XCL2Q9UBD3 114 aa7.92□□□□□ -1.14
TPM1-229ENST00000561242 SOCS3O14543 225 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 STAG3L2P0CL84 134 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 FXYD7P58549 80 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 MORN5Q5VZ52 161 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 TMED6Q8WW62 240 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 LINC01587Q99440 93 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 NIPSNAP3BQ9BS92 247 aa7.91□□□□□ -1.14
TPM1-229ENST00000561242 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.14
TPM1-229ENST00000561242 ZNF705FA8MVS1 300 aaPredicted RBP7.9□□□□□ -1.14
TPM1-229ENST00000561242 F6UB75 175 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 BOLA2-SMG1P6H3BVE0 249 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 GPX1P07203 203 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 HTN1P15515 57 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 CDKN1BP46527 198 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
TPM1-229ENST00000561242 BLOC1S1P78537 153 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.14
TPM1-229ENST00000561242 RNF183Q96D59 192 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 FXYD5Q96DB9 178 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 C20orf173Q96LM9 149 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 CLUHP3Q96NS8 147 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 CITED4Q96RK1 184 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 TM2D3Q9BRN9 247 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 CYTL1Q9NRR1 136 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 RFNGQ9Y644 331 aa7.9□□□□□ -1.14
TPM1-229ENST00000561242 NOTCH3Q9UM47 2321 aa7.9□□□□□ -1.15
TPM1-229ENST00000561242 TRAV8-2A0A0B4J237 113 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 A0A1B0GV50 99 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 TMEM189A5PLL7 270 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 SMIM9A6NGZ8 99 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 J3KRW8 73 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 MRPS12O15235 138 aaKnown RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 ZNF705DP0CH99 300 aaPredicted RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 ZNF705BP0CI00 300 aaPredicted RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 MIFP14174 115 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 UBE2G2P60604 165 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 UBE2G1P62253 170 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 RRN3P1Q2M238 152 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 LINC00322Q6ZN03 302 aaPredicted RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 TMEM256Q8N2U0 113 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 ARL6IP6Q8N6S5 226 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 SAT2Q96F10 170 aaPredicted RBP7.89□□□□□ -1.15
TPM1-229ENST00000561242 PHYHIPLQ96FC7 376 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
TPM1-229ENST00000561242 A0A1B0GVG6 124 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 A0A1W2PRE2 83 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 G3V3Q6 166 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 SLC17A3O00476 420 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 HLA-DMBP28068 263 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 ZNF138P52744 262 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 FGF8P55075 233 aaPredicted RBP7.88□□□□□ -1.15
TPM1-229ENST00000561242 SPINK13Q1W4C9 94 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 C5orf17Q8NAS9 161 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 IGF2BP2-AS1Q96M15 143 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 WWC2-AS2Q96NR7 200 aa7.88□□□□□ -1.15
TPM1-229ENST00000561242 TEX48A0A1B0GUV7 120 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 RGS13O14921 159 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
TPM1-229ENST00000561242 RAB14P61106 215 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 GOLT1AQ6ZVE7 132 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 C20orf144Q9BQM9 153 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 OVOL2Q9BRP0 275 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 RETNQ9HD89 108 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 MANBALQ9NQG1 85 aa7.87□□□□□ -1.15
TPM1-229ENST00000561242 MGAM2Q2M2H8 2515 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 CXorf65A6NEN9 183 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 M0R3E3 92 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 EIF3GO75821 320 aaKnown RBP eCLIP7.86□□□□□ -1.15
TPM1-229ENST00000561242 NDUFB4O95168 129 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 S100A9P06702 114 aaKnown RBP7.86□□□□□ -1.15
TPM1-229ENST00000561242 CT45A10P0DMU9 189 aa7.86□□□□□ -1.15
TPM1-229ENST00000561242 RNASE4P34096 147 aaKnown RBP7.86□□□□□ -1.15
TPM1-229ENST00000561242 SULT1A2P50226 295 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms