RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 NUPR2A6NF83 97 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 E5RGE8 158 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 COX7A2P2O60397 106 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 JTBO76095 146 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 MIFP14174 115 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 HLA-DMBP28068 263 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 NANOS2P60321 138 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 NUTF2P61970 127 aaKnown RBP4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 HBG1P69891 147 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 HBG2P69892 147 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 BAXQ07812 192 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 FGL1Q08830 312 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 OPCMLQ14982 345 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 FAM78BQ5VT40 261 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 SPATA31B1PQ5VZV4 182 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 CEMP1Q6PRD7 247 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 AMTNQ6UX39 209 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 OR4B1Q8NGF8 309 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 C11orf45Q8TAV5 145 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 PHLDA1Q8WV24 401 aaPredicted RBP4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 PPP1R1CQ8WVI7 109 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 C1QTNF4Q9BXJ3 329 aa4.34□□□□□ -1.71
CTDSPL2-204ENST00000558966 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.72
CTDSPL2-204ENST00000558966 DNAH6Q9C0G6 4158 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF705FA8MVS1 300 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 SSNA1O43805 119 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 RLN2P04090 185 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 SNRPCP09234 159 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF705DP0CH99 300 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF705BP0CI00 300 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 CXCL3P19876 107 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 FGF7P21781 194 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 RPL29P47914 159 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 CYCSP99999 105 aaKnown RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 PSG9Q00887 426 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 RAB31Q13636 194 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 ATP6V1FQ16864 119 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 EBLN2Q6P2I7 272 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF705AQ6ZN79 300 aaPredicted RBP4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 S100A7AQ86SG5 101 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 OR5C1Q8NGR4 320 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 RNF126Q9BV68 326 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 SLC39A9Q9NUM3 307 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
CTDSPL2-204ENST00000558966 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 H3BQ15 152 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 H3BTX0 84 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 SLC17A3O00476 420 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 MPC2O95563 127 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PTTG1O95997 202 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 IGLC2P0DOY2 106 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PRB4P10163 310 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 CXCL2P19875 107 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 CNN1P51911 297 aaKnown RBP4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 B2MP61769 119 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 CLINT1Q14677 625 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PSG3Q16557 428 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 GCSAMLQ5JQS6 135 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 LCN15Q6UWW0 184 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 Q6ZRG5 221 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 BPIFA4PQ86YQ2 179 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 C1orf158Q8N1D5 194 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF738Q8NE65 137 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 THAP6Q8TBB0 222 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 TM2D2Q9BX73 214 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 MFFQ9GZY8 342 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 SLC25A31Q9H0C2 315 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 HRH4Q9H3N8 390 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 DNAJC4Q9NNZ3 241 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 ZNF331Q9NQX6 463 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 ALG5Q9Y673 324 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PXMP4Q9Y6I8 212 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 DNAH10Q8IVF4 4471 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 M0R2Z0 102 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 CRXO43186 299 aaPredicted RBP4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 MPDU1O75352 247 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 OR11H7Q8NGC8 314 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PFDN5Q99471 154 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 PPP1R14DQ9NXH3 145 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 MBD2Q9UBB5 411 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 RNF24Q9Y225 148 aa4.32□□□□□ -1.72
CTDSPL2-204ENST00000558966 IGHV3OR16-12A0A075B7B8 117 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 PRAC2D3DTV9 90 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 PET100P0DJ07 73 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 HIST1H1AQ02539 215 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 SPINK13Q1W4C9 94 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 Q6ZTC4 211 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 OR8A1Q8NGG7 326 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 LRRC20Q8TCA0 184 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 RPUSD4Q96CM3 377 aaKnown RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 SAT2Q96F10 170 aaPredicted RBP4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 IGF2BP2-AS1Q96M15 143 aa4.31□□□□□ -1.72
CTDSPL2-204ENST00000558966 SLC50A1Q9BRV3 221 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms