RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PEX7O00628 323 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 CEBPGP53567 150 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 PSG3Q16557 428 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 IGFL4Q6B9Z1 124 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 CYB561D1Q8N8Q1 229 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 MDFIQ99750 246 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 ATG101Q9BSB4 218 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 RPH3ALQ9UNE2 315 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 C9JQL5 133 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 M0R3E3 92 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 TCRAP04437 139 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 SFTA3P0C7M3 94 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 AKR1C3P42330 323 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 GNG5P63218 68 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 GUCA2BQ16661 112 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 RNF182Q8N6D2 247 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 LINC00052Q96N35 136 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 GPR61Q9BZJ8 451 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 WNK1Q9H4A3 2382 aa12.66□□□□□ -0.38
SNX1-203ENST00000558040 FBN1P35555 2871 aaKnown RBP12.65□□□□□ -0.38
SNX1-203ENST00000558040 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
SNX1-203ENST00000558040 CNN1P51911 297 aaKnown RBP12.65□□□□□ -0.38
SNX1-203ENST00000558040 SOHLH1Q5JUK2 328 aa12.65□□□□□ -0.38
SNX1-203ENST00000558040 TMEM218A2RU14 115 aa12.64□□□□□ -0.39
SNX1-203ENST00000558040 DIRC3C9JPN6 131 aa12.64□□□□□ -0.39
SNX1-203ENST00000558040 S100A9P06702 114 aaKnown RBP12.64□□□□□ -0.39
SNX1-203ENST00000558040 ZNF688P0C7X2 276 aa12.64□□□□□ -0.39
SNX1-203ENST00000558040 IZUMO1RA6ND01 250 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
SNX1-203ENST00000558040 CMC4P56277 68 aaPredicted RBP12.63□□□□□ -0.39
SNX1-203ENST00000558040 UBE2G1P62253 170 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 FAM74A3Q4VXF1 159 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 PSMG4Q5JS54 123 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 PRR31Q5SQ13 230 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 GOLT1AQ6ZVE7 132 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 SPATA3Q8NHX4 192 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 C2CD4CQ8TF44 421 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 C20orf173Q96LM9 149 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 PARLQ9H300 379 aa12.63□□□□□ -0.39
SNX1-203ENST00000558040 RBAKDNA6NC62 111 aa12.62□□□□□ -0.39
SNX1-203ENST00000558040 ZNF705FA8MVS1 300 aaPredicted RBP12.62□□□□□ -0.39
SNX1-203ENST00000558040 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
SNX1-203ENST00000558040 ZNF674Q2M3X9 581 aa12.62□□□□□ -0.39
SNX1-203ENST00000558040 FAM24BQ8N5W8 94 aa12.62□□□□□ -0.39
SNX1-203ENST00000558040 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
SNX1-203ENST00000558040 ZNF256Q9Y2P7 627 aaPredicted RBP12.62□□□□□ -0.39
SNX1-203ENST00000558040 ZNF727A8MUV8 499 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 F8W036 122 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 IGLL1P15814 213 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 RPL35P42766 123 aaKnown RBP12.61□□□□□ -0.39
SNX1-203ENST00000558040 TAS2R60P59551 318 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 TMEM183BQ1AE95 376 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 OR10J6PQ8NGY7 276 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 SMIM7Q9BQ49 75 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 SEC11CQ9BY50 192 aa12.61□□□□□ -0.39
SNX1-203ENST00000558040 IGKV2-40A0A087WW87 121 aaPredicted RBP12.6□□□□□ -0.39
SNX1-203ENST00000558040 WIPF1O43516 503 aa12.6□□□□□ -0.39
SNX1-203ENST00000558040 IGKV2D-40P01614 121 aaPredicted RBP12.6□□□□□ -0.39
SNX1-203ENST00000558040 DERL1Q9BUN8 251 aa12.6□□□□□ -0.39
SNX1-203ENST00000558040 KLF12Q9Y4X4 402 aa12.6□□□□□ -0.39
SNX1-203ENST00000558040 TENM1Q9UKZ4 2725 aa12.6□□□□□ -0.39
SNX1-203ENST00000558040 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 DEFB131AP59861 70 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 BEAN1Q3B7T3 259 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 KRTAP21-3Q3LHN1 58 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 LINC00479Q96M42 142 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 MAP6D1Q9H9H5 199 aa12.59□□□□□ -0.39
SNX1-203ENST00000558040 TRAV34A0A0B4J273 112 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 TRBV6-1A0A0K0K1D8 114 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 OR11H12B2RN74 326 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 C9JCJ5 164 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 ATP6V1G1O75348 118 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 GNG4P50150 75 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 FLI1Q01543 452 aaPredicted RBP12.58□□□□□ -0.4
SNX1-203ENST00000558040 TMEM78Q5T7P6 136 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 FOXI2Q6ZQN5 318 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 FAM110AQ9BQ89 295 aa12.58□□□□□ -0.4
SNX1-203ENST00000558040 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 ADCYAP1P18509 176 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
SNX1-203ENST00000558040 CENPWQ5EE01 88 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 C9orf47Q6ZRZ4 202 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 Q86TA4 180 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 PSG8Q9UQ74 426 aa12.57□□□□□ -0.4
SNX1-203ENST00000558040 CARHSP1Q9Y2V2 147 aaKnown RBP12.57□□□□□ -0.4
SNX1-203ENST00000558040 A0A0J9YX75 114 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 NPIPB6E9PJ23 425 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 DUSP14O95147 198 aaKnown RBP12.56□□□□□ -0.4
SNX1-203ENST00000558040 IGLV2-11P01706 119 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 PRB4P10163 310 aaPredicted RBP12.56□□□□□ -0.4
SNX1-203ENST00000558040 TMEM241Q24JQ0 296 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
SNX1-203ENST00000558040 C10orf91Q5T1B1 145 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms