RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PRSS46E5RG02 174 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 H3BP45 60 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 CXCL2P19875 107 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.9
ACTN1-219ENST00000556432 MRPL23Q16540 153 aaKnown RBP9.4□□□□□ -0.9
ACTN1-219ENST00000556432 NEGR1Q7Z3B1 354 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 WFDC10BQ8IUB3 73 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 ZBTB8BQ8NAP8 495 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-219ENST00000556432 SMIM4Q8WVI0 70 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 C8orf49Q96NF6 230 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 SCGB3A2Q96PL1 93 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 SLC50A1Q9BRV3 221 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
ACTN1-219ENST00000556432 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 PRO0255Q9UI72 69 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 V9GYH0 126 aa9.4□□□□□ -0.9
ACTN1-219ENST00000556432 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 H3BTX0 84 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 CRYGDP07320 174 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 SOSTQ9BQB4 213 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 ARL6Q9H0F7 186 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
ACTN1-219ENST00000556432 PIGBOS1A0A0B4J2F0 54 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 LINC00854A0A1B0GVQ3 168 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 FABP12A6NFH5 140 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 K7EP13 123 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 CTDSPLO15194 276 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 SYNGR2O43760 224 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 PRAF2O60831 178 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 PITX3O75364 302 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 ST6GAL2Q96JF0 529 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 MCUBQ9NWR8 336 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 SCP2D1Q9UJQ7 156 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 STRAPQ9Y3F4 350 aaKnown RBP9.38□□□□□ -0.91
ACTN1-219ENST00000556432 KLF12Q9Y4X4 402 aa9.38□□□□□ -0.91
ACTN1-219ENST00000556432 E5RGE8 158 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 SLC17A3O00476 420 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 CT45A10P0DMU9 189 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 SRIP30626 198 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 SELENOTP62341 195 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 MRPS10P82664 201 aaKnown RBP9.37□□□□□ -0.91
ACTN1-219ENST00000556432 SLAQ13239 276 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 C11orf72Q8NBR9 251 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 ZNF431Q8TF32 576 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-219ENST00000556432 PCNPQ8WW12 178 aaKnown RBP9.37□□□□□ -0.91
ACTN1-219ENST00000556432 ARV1Q9H2C2 271 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 MRPL16Q9NX20 251 aaKnown RBP9.37□□□□□ -0.91
ACTN1-219ENST00000556432 HHLA3Q9XRX5 114 aa9.37□□□□□ -0.91
ACTN1-219ENST00000556432 DUXBA0A1W2PPF3 345 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 C7orf71A4D174 169 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 CRYBA4P53673 196 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 PLP1P60201 277 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 ZNF415Q09FC8 603 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 PYDC2Q56P42 97 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 BPIFA4PQ86YQ2 179 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
ACTN1-219ENST00000556432 TRGV4A0A0C4DH28 118 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 MRPS12O15235 138 aaKnown RBP9.35□□□□□ -0.91
ACTN1-219ENST00000556432 SPINK4O60575 86 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
ACTN1-219ENST00000556432 VAMP1P23763 118 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 S100A5P33763 92 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 TCL1AP56279 114 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 RRAS2P62070 204 aaPredicted RBP9.35□□□□□ -0.91
ACTN1-219ENST00000556432 TEPPQ6URK8 271 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 PATE2Q6UY27 113 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 LINC00305Q7Z4B0 112 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 EIF4E3Q8N5X7 224 aaKnown RBP9.35□□□□□ -0.91
ACTN1-219ENST00000556432 Q8N814 137 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 ODF3Q96PU9 254 aa9.35□□□□□ -0.91
ACTN1-219ENST00000556432 ANKRD20A5PA0PJZ0 165 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 LRCOL1A6NCL2 159 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 SLC25A6P12236 298 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 RNASE4P34096 147 aaKnown RBP9.34□□□□□ -0.91
ACTN1-219ENST00000556432 VGLL1Q99990 258 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 SRRQ9GZT4 340 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 Q9HAA7 133 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 NDUFA13Q9P0J0 144 aa9.34□□□□□ -0.91
ACTN1-219ENST00000556432 RCL1Q9Y2P8 373 aaKnown RBP9.34□□□□□ -0.91
ACTN1-219ENST00000556432 A6NHS1 94 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 K7EQD1 137 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 COX7A2P2O60397 106 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 C1QBP02746 253 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 GYPEP15421 78 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 SLC38A11Q08AI6 406 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 BTN1A1Q13410 526 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 FHL2Q14192 279 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 ARPC5LQ9BPX5 153 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 RABL2AQ9UBK7 228 aaPredicted RBP9.33□□□□□ -0.92
ACTN1-219ENST00000556432 RABL2BQ9UNT1 228 aa9.33□□□□□ -0.92
ACTN1-219ENST00000556432 TRAV5A0A0B4J249 113 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 GOSR2O14653 212 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 RGS13O14921 159 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 MPDU1O75352 247 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 OXTP01178 125 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 HOXB5P09067 269 aa9.32□□□□□ -0.92
ACTN1-219ENST00000556432 CD300CQ08708 224 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms